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See other CASKIN1 CNV Assays ›
Gene Symbol
CASKIN1
Assay Reference Genome
Location

Chr.16:2187237 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01648710_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57524

Gene Name:

 CASK interacting protein 1

Gene Aliases:

 ANKS5A

Location:

 Chr.16:2177183-2196464 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CASKIN1 NM_020764.3 NP_065815.1
AF451977.1 AAL49758.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CHTF18 E4F1 AMDHD2 NTN3 ERVK13-1 MRPL28 C16orf91 TSC2 CCNF LINC00235 EME2 MIR3178 SOX8 PDPK1 WFIKKN1 BRICD5 PIGQ MIR6767 HN1L LOC105371047 TPSD1 HAGHL NUBP2 LOC107987233 MAPK8IP3 MIR3677 GNPTG FBXL16 SNHG9 METTL26 DECR2 RAB26 LOC105371045 RHOT2 PGP RHBDL1 RAB40C LOC107984876 BAIAP3 UBE2I MIR940 MLST8 TRAF7 IGFALS LINC00254 HS3ST6 HBZ ZNF598 NOXO1 MEIOB RPS2 WDR90 GNG13 PRSS27 MIR3177 SYNGR3 ATP6V0C DNASE1L2 CCDC78 HAGH NHLRC4 CAPN15 LMF1 CRAMP1 POLR3K LOC106660606 PTX4 PRR25 NPW ARHGDIG WDR24 TMEM204 HBQ1 MPG NTHL1 WASIR2 TBL3 ABCA3 ABCA17P LOC105371049 PRSS29P SSTR5 HBA2 MIR3176 HBA1 MCRIP2 PKD1 RPL23AP5 TPSG1 FLJ42627 C1QTNF8 MIR1225 FAM173A TPSB2 HBM LOC100287175 SNORD60 FAM234A CASKIN1 CLCN7 NPRL3 METRN SLC9A3R2 LOC652276 SNHG19 GFER NARFL MIR3180-5 TBC1D24 DDX11L10 SNORA78 RNF151 KCTD5 RNPS1 PDIA2 LUC7L TELO2 MIR4516 LOC105371184 MIR5587 TMEM8A MIR6511B1 UNKL SSTR5-AS1 NME4 LOC105371046 RHBDF1 IFT140 LMF1-AS1 SNORA64 C16orf59 RPUSD1 MIR4717 MSLN LOC105371038 STUB1 RAB11FIP3 RPL3L SNORA10 MIR6768 FAHD1 CACNA1H SNRNP25 PRR35 TSR3 NDUFB10 NME3 AXIN1 MIR662 JMJD8 LOC101929280 LOC100134368 MSRB1 LOC729652 CCDC154 ECI1 TPSAB1 SPSB3 MIR6859-4 MRPS34 CEMP1 RGS11
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss MIR6511B1 ABCA3 E4F1 LOC105371049 TSC2 MIR940 MLST8 TRAF7 PKD1 MIR4717 MIR1225 ZNF598 NOXO1 SNORD60 BRICD5 CASKIN1 SLC9A3R2 SYNGR3 SNHG19 GFER DNASE1L2 MIR3677 LOC106660606 MIR3180-5 NPW RAB26 ECI1 RNPS1 NTHL1 PGP TBL3 MIR4516
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss MIR6511B1 E4F1 SNHG19 DNASE1L2 LOC105371049 TSC2 MIR3180-5 MLST8 TRAF7 RAB26 PKD1 ECI1 PGP MIR1225 MIR4516 SNORD60 BRICD5 CASKIN1
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss E4F1 SNHG19 DNASE1L2 MIR3677 LOC106660606 MIR940 MLST8 TRAF7 RAB26 ECI1 RNPS1 PGP SNORD60 BRICD5 CASKIN1
nsv457349 Chr.16:2055054 - 2200730 on Build GRCh38 Loss MIR6511B1 TRAF7 RAB26 PKD1 SNHG19 LOC105371049 TSC2 MIR3180-5 MIR1225 MIR4516 SNORD60 CASKIN1
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss TRAF7 E4F1 DNASE1L2 ECI1 MIR3677 RNPS1 PGP LOC106660606 BRICD5 MIR940 CASKIN1 MLST8
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR6511B1 ABCA3 E4F1 ABCA17P AMDHD2 NTN3 LOC105371049 TSC2 CCNF MIR940 C16orf59 MLST8 TRAF7 MIR3178 PKD1 MIR4717 PDPK1 MIR1225 SNORD60 BRICD5 CASKIN1 MIR6768 MIR6767 LOC652276 ATP6V0C SNHG19 DNASE1L2 MIR3677 LOC106660606 MIR3180-5 TBC1D24 RAB26 LOC729652 ECI1 RNPS1 PGP MIR4516 CEMP1
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion ABCA3 E4F1 SNHG19 DNASE1L2 MIR3677 LOC106660606 MIR940 MLST8 TRAF7 RAB26 MIR4717 ECI1 RNPS1 PGP SNORD60 BRICD5 CASKIN1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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