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See other CDHR5 CNV Assays ›
Gene Symbol
CDHR5
Assay Reference Genome
Location

Chr.11:619155 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01652312_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 53841

Gene Name:

 cadherin related family member 5

Gene Aliases:

 MLPCDH, MU-PCDH, MUCDHL, MUPCDH

Location:

 Chr.11:616565-625067 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDHR5 NM_001171968.1 NP_001165439.1
NM_021924.4 NP_068743.2
NM_031264.3 NP_112554.2
XM_006718253.3 XP_006718316.1
XM_011520188.2 XP_011518490.1
XM_011520189.2 XP_011518491.1
XM_011520190.2 XP_011518492.1
XM_011520191.2 XP_011518493.1
AF258675.1 AAG16732.1
AF258676.1 AAG16733.1
AF276242.1 AAG30821.1
AF301909.1 AAG33495.1
AK000226.1 BAA91021.1
AK000384.1 BAA91130.1
AK025012.1 BAB15052.1
AK300991.1
AK308040.1
AY358368.1 AAQ88734.1
BC038405.1 AAH38405.1
DQ491193.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion LOC143666 HRAS IRF7 MIR210HG PHRF1 LMNTD2 LRRC56 CDHR5 RASSF7 LOC101059906 MIR210 SCT
nsv552861 Chr.11:589246 - 662407 on Build GRCh38 Loss IRF7 PHRF1 CDHR5 DEAF1 DRD4 SCT
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PANO1 LOC143666 HRAS MIR210HG MIR6744 ANO9 EPS8L2 POLR2L TALDO1 LMNTD2 TMEM80 RASSF7 RPLP2 PTDSS2 CD151 TOLLIP LOC171391 PIDD1 IRF7 MUC2 LRRC56 CHID1 CEND1 MUC6 CRACR2B TSPAN4 MIR210 MUC5B DRD4 AP2A2 PDDC1 TOLLIP-AS1 SLC25A22 PNPLA2 SNORA52 PHRF1 RNH1 LOC101927503 CDHR5 LOC101059906 DEAF1 SIGIRR MUC5AC SCT
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain LOC143666 HRAS IRF7 MIR210HG LRRC56 MIR210 DRD4 PHRF1 LMNTD2 CDHR5 RASSF7 DEAF1 SCT
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain LOC143666 HRAS IRF7 MIR210HG LRRC56 MIR210 DRD4 PHRF1 LMNTD2 RNH1 CDHR5 RASSF7 LOC101059906 DEAF1 SCT PTDSS2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PANO1 LOC143666 HRAS MIR210HG ANO9 EPS8L2 POLR2L TALDO1 LMNTD2 TMEM80 RASSF7 RPLP2 PTDSS2 CD151 LOC171391 PIDD1 IRF7 LRRC56 CHID1 CEND1 CRACR2B TSPAN4 MIR210 DRD4 AP2A2 PDDC1 SLC25A22 PNPLA2 SNORA52 PKP3 PHRF1 B4GALNT4 RNH1 CDHR5 LOC101059906 DEAF1 SIGIRR SCT
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PANO1 LOC143666 HRAS MIR210HG EPS8L2 POLR2L TALDO1 LMNTD2 TMEM80 RASSF7 RPLP2 PTDSS2 CD151 LOC171391 PIDD1 IRF7 LRRC56 CHID1 CEND1 CRACR2B TSPAN4 MIR210 DRD4 PDDC1 SLC25A22 PNPLA2 SNORA52 PHRF1 RNH1 CDHR5 LOC101059906 DEAF1 SCT
dgv1524n54 Chr.11:610277 - 619789 on Build GRCh38 Loss IRF7 PHRF1 CDHR5
nsv552856 Chr.11:549119 - 619789 on Build GRCh38 Gain LOC143666 IRF7 MIR210HG PHRF1 LMNTD2 LRRC56 CDHR5 RASSF7 MIR210
nsv467634 Chr.11:511805 - 619789 on Build GRCh38 Loss LOC143666 HRAS IRF7 MIR210HG PHRF1 LMNTD2 LRRC56 CDHR5 RASSF7 LOC101059906 MIR210
nsv552865 Chr.11:612843 - 626730 on Build GRCh38 Loss IRF7 CDHR5 SCT
dgv1522n54 Chr.11:557342 - 656845 on Build GRCh38 Loss LOC143666 IRF7 MIR210HG PHRF1 LMNTD2 CDHR5 RASSF7 DEAF1 MIR210 DRD4 SCT
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss LOC143666 HRAS IFITM3 IRF7 MIR210HG IFITM2 IFITM5 LRRC56 ANO9 MIR210 PGGHG PKP3 PHRF1 B4GALNT4 LMNTD2 RNH1 CDHR5 RASSF7 LOC101059906 SIGIRR IFITM1 PTDSS2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PANO1 LOC143666 HRAS MIR210HG MIR6744 ANO9 EPS8L2 POLR2L TALDO1 LMNTD2 TMEM80 RASSF7 RPLP2 PTDSS2 CD151 TOLLIP LOC171391 PIDD1 IRF7 MUC2 LRRC56 CHID1 CEND1 MUC6 CRACR2B TSPAN4 MIR210 MUC5B DRD4 AP2A2 PDDC1 SLC25A22 PNPLA2 SNORA52 PKP3 PHRF1 B4GALNT4 RNH1 LOC101927503 CDHR5 LOC101059906 DEAF1 SIGIRR MUC5AC SCT
nsv552862 Chr.11:605856 - 619789 on Build GRCh38 Loss IRF7 PHRF1 CDHR5
esv2762889 Chr.11:606294 - 653614 on Build GRCh38 Loss IRF7 PHRF1 CDHR5 DEAF1 DRD4 SCT
nsv528415 Chr.11:558884 - 620599 on Build GRCh38 Loss LOC143666 IRF7 MIR210HG PHRF1 LMNTD2 CDHR5 RASSF7 MIR210

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