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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89645389 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01667040_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 6 1445 NP_001076783.1
NM_002768.4 7 1465 NP_002759.2
NR_046418.2 7 1633
AK302055.1 6 739
BC010000.2 2 1053 AAH10000.2
D38554.1 7 1333 BAA07557.1
U58048.1 7 1522 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss SPATA33 LOC105371419 FANCA GAS8-AS1 AFG3L1P DEF8 TUBB3 VPS9D1 TCF25 CHMP1A MC1R SPIRE2 GAS8 CDK10 CENPBD1 VPS9D1-AS1 ZNF276 DBNDD1 DPEP1 SPATA2L LOC107984817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss SPATA33 ANKRD11 FANCA GAS8-AS1 AFG3L1P TUBB3 VPS9D1 CPNE7 SNORD68 SPIRE2 GAS8 CENPBD1 URAHP RPL13 FAM157C DBNDD1 SPATA2L LOC105371419 LOC105371414 ZNF778 LOC101927817 TUBB8P7 DEF8 TCF25 CHMP1A LOC100287036 MC1R CDK10 PRDM7 VPS9D1-AS1 SPG7 ZNF276 DPEP1 LOC107984817
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA33 CDK10 DPEP1 SPATA2L CHMP1A
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPATA33 ANKRD11 RPL13 SPG7 LOC101927817 DPEP1 CPNE7 SNORD68 CHMP1A
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CDT1 SNAI3 LINC00304 AFG3L1P ACSF3 LOC339059 TUBB3 VPS9D1 CPNE7 SNORD68 LOC100129697 SPIRE2 GAS8 MIR4722 RPL13 DBNDD1 SPATA2L LOC105371414 LOC400558 CBFA2T3 TCF25 LOC100287036 LOC100289580 CDK10 CTU2 VPS9D1-AS1 ZNF276 SNAI3-AS1 DPEP1 TRAPPC2L LOC107984817 SPATA33 ANKRD11 FANCA GAS8-AS1 RNF166 CDH15 PIEZO1 GALNS LOC101927793 CENPBD1 URAHP FAM157C LOC105371419 ZNF778 PABPN1L LOC101927817 TUBB8P7 DEF8 APRT CHMP1A LOC105371409 MC1R LOC107987238 PRDM7 SPG7 IL17C CYBA MVD SLC22A31
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPATA33 FANCA VPS9D1 CPNE7 SNORD68 CHMP1A CDK10 RPL13 VPS9D1-AS1 SPG7 ZNF276 DPEP1 SPATA2L
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain SPATA33 RPL13 SPG7 DPEP1 CPNE7 SNORD68 CHMP1A

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