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System Message

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Gene Symbol: JAG1
Assay Reference Genome Location: Chr.20:10649601 on build GRCh38
Cytoband: 20p12.2

Assay ID

Hs01672585_cn

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Availability	Made To Order
Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	182
Gene Name:	jagged 1
Gene Aliases:	AGS, AHD, AWS, CD339, HJ1, JAGL1
Location:	Chr.20:10637684-10674046 on Build GRCh38
Assay Gene Location:	Overlaps Intron 11 - Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
JAG1	NM_000214.2			NP_000205.1
	XM_017027707.1			XP_016883196.1
	AF003837.1			AAC51731.1
	AF028593.1			AAB84053.1
	AK302554.1
	AK312722.1
	BC098393.1			AAH98393.1
	BC126205.1
	BC126207.1
	U61276.1			AAB39007.1
	U73936.1			AAC52020.1
	U77720.1			AAC51323.1

Target Gene Details

Entrez Gene ID:	102465525
Gene Name:	microRNA 6870
Gene Aliases:	hsa-mir-6870
Location:	Chr.20:10649636-10649695 on Build GRCh38
Assay Gene Location:	Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6870	NR_106930.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3291	Chr.20:10623650 - 10655782 on Build GRCh38	Insertion	JAG1 SLX4IP MIR6870
nsv522874	Chr.20:9918791 - 10838562 on Build GRCh38	Loss	MKKS ANKEF1 JAG1 LOC105372526 SLX4IP LOC101929371 SNAP25 LOC101929395 SNAP25-AS1 MIR6870
nsv833920	Chr.20:10460192 - 10651051 on Build GRCh38	Gain	JAG1 SLX4IP MIR6870

More Information

Set Membership:

Intragenic

Non-exonic

DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

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