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Gene Symbol
SLC12A9
Assay Reference Genome
Location

Chr.7:100856999 on build GRCh38
Cytoband
7q22.1
Assay ID Hs01677888_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 56996

Gene Name:

 solute carrier family 12 member 9

Gene Aliases:

 CCC6, CIP1, WO3.3, hCCC6

Location:

 Chr.7:100852719-100867012 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC12A9 NM_001267812.1 5 740 NP_001254741.1
NM_001267814.1 3 477 NP_001254743.1
NM_020246.3 5 740 NP_064631.2
XM_005250502.2 3 476 XP_005250559.1
XM_006716054.2 3 458 XP_006716117.1
XM_006716055.2 XP_006716118.1
XM_011516414.1 XP_011514716.1
AB033284.1 5 667 BAB40456.1
AF284422.1 5 707 AAF88060.1
AK024420.1 2 1000 BAB15710.1
AK024421.1 1 1559 BAB15711.1
AK024494.1 1 206 BAB15784.1
AK090458.1 BAC03439.1
AK128873.1 3 423
AK301411.1 5 740
BC000154.2 3 459 AAH00154.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759547 Chr.7:100757867 - 101105965 on Build GRCh38 Gain+Loss SRRT LOC102724094 SLC12A9 EPHB4 MUC12 TRIP6 ACHE ZAN MIR6875 MUC3A MUC17 UFSP1 TRIM56
nsv831073 Chr.7:100828037 - 100947257 on Build GRCh38 Loss SRRT SLC12A9 TRIP6 ACHE MIR6875 UFSP1
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion PCOLCE-AS1 SRRT NYAP1 EPHB4 MUC12 MEPCE GAL3ST4 STAG3 EPO FIS1 AGFG2 MIR93 TFR2 STAG3L5P ZASP SAP25 LRCH4 PMS2P1 PILRA CLDN15 GPC2 C7orf43 PILRB MIR6840 GIGYF1 ZKSCAN1 PLOD3 PPP1R35 MIR4658 ZNF3 LOC105375429 MUC17 POP7 MOSPD3 AZGP1P1 LOC102724094 CNPY4 SERPINE1 SLC12A9 TRIP6 C7orf61 ACHE MIR6875 MIR4653 FBXO24 GATS AP4M1 PCOLCE MIR25 UFSP1 ACTL6B MOGAT3 AP1S1 COPS6 SPDYE3 ZAN TAF6 NAT16 ZNHIT1 MCM7 MBLAC1 MUC3A STAG3L5P-PVRIG2P-PILRB PVRIG2P PVRIG AZGP1 GNB2 TSC22D4 MIR106B ZSCAN21 LAMTOR4 TRIM56 VGF ZCWPW1
nsv607965 Chr.7:100776465 - 100899511 on Build GRCh38 Loss SRRT SLC12A9 EPHB4 TRIP6 ACHE ZAN MIR6875 UFSP1
nsv5870 Chr.7:100845707 - 100875145 on Build GRCh38 Insertion SRRT SLC12A9 TRIP6 MIR6875
nsv607966 Chr.7:100824534 - 100920838 on Build GRCh38 Loss SRRT SLC12A9 EPHB4 TRIP6 ACHE MIR6875 UFSP1
nsv1020837 Chr.7:100715499 - 100911015 on Build GRCh38 Loss SRRT SLC12A9 EPHB4 TRIP6 ACHE ZAN MIR6875 UFSP1 EPO

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