Hs01696350_cn

• Gene Symbol: DDX28
• Assay Reference Genome Location: Chr.16:68021705 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 55794
• Gene Name: DEAD-box helicase 28
• Gene Aliases: MDDX28
• Location: Chr.16:68021274-68023867 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX28	NM_018380.3	1	2163	NP_060850.2
	AK002144.1	1	1738	BAA92106.1
	BC024273.1	1	1505	AAH24273.1
	BM671594.1	1	448

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2666619	Chr.16:68003989 - 68045407 on Build GRCh38	Deletion	LOC100131303 DDX28 DUS2
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	CARMIL2 NOL3 EDC4 TMEM208 LCAT KCTD19 ELMO3 LOC107984813 THAP11 FAM65A CTRL PLEKHG4 AGRP TSNAXIP1 E2F4 CTCF C16orf86 DUS2 LOC100131303 PARD6A ACD ENKD1 RANBP10 CENPT LRRC36 TPPP3 DDX28 NUTF2 MIR328 FHOD1 DPEP3 LOC100505942 FBXL8 LRRC29 KIAA0895L SLC12A4 ATP6V0D1 GFOD2 ZDHHC1 TRADD EXOC3L1 PSKH1 HSF4 LOC105369155 NRN1L HSD11B2 PSMB10 DPEP2 SLC9A5
esv3638897	Chr.16:68004075 - 68045657 on Build GRCh38	Loss	LOC100131303 DDX28 DUS2
esv3638899	Chr.16:68008886 - 68035332 on Build GRCh38	Loss	LOC100131303 DDX28 DUS2
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	CARMIL2 NOL3 EDC4 TMEM208 LCAT KCTD19 ELMO3 LOC107984813 THAP11 FAM65A CTRL PLEKHG4 AGRP TSNAXIP1 E2F4 CTCF C16orf86 DUS2 LOC100131303 PARD6A ACD ENKD1 RANBP10 CENPT LRRC36 TPPP3 DDX28 NUTF2 MIR328 FHOD1 DPEP3 LOC100505942 FBXL8 LRRC29 KIAA0895L SLC12A4 ATP6V0D1 GFOD2 ZDHHC1 TRADD B3GNT9 EXOC3L1 PSKH1 HSF4 LOC105369155 NRN1L HSD11B2 PSMB10 DPEP2 C16orf70 SLC9A5

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

RNA secondary structure unwinding
mitochondrial large ribosomal subunit assembly

Function(s)

ATP-dependent RNA helicase activity
ATP binding
rRNA binding
poly(A) RNA binding