Hs01741275_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81246027 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	3307	NP_001033073.1
	XM_005257019.1	17	3425	XP_005257076.1
	XM_011524288.1	17	3446	XP_011522590.1
	XM_011524289.1	16	3422	XP_011522591.1
	XM_011524290.1	15	2701	XP_011522592.1
	BI194553.1	1	68
	BU552914.1	1	644

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	C17orf89 SLC38A10 TEPSIN
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	MIR6786 TMEM105 C17orf89 SLC38A10 RPTOR MIR3186 CEP131 PDE6G MIR657 FSCN2 BAHCC1 HGS MIR1250 CHMP6 LOC107985022 TEPSIN LOC400627 BAIAP2 LOC100130370 AATK-AS1 CCDC137 NPLOC4 ARL16 MIR3065 LOC105371921 ACTG1 MIR338 LOC101928855 SLC25A10 LOC100129503 BAIAP2-AS1 LINC00482 MRPL12 MIR4740 LOC107985021 LOC105371925 OXLD1 AATK FAAP100 TSPAN10
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	NARF PCYT2 ASPSCR1 C17orf62 SLC38A10 STRA13 CEP131 PDE6G HEXDC SNORD134 PPP1R27 ALYREF CSNK1D MYADML2 MIR6787 MCRIP1 TEPSIN LOC100130370 LOC105376790 LOC105371944 ARL16 RFNG ACTG1 ARHGDIA SLC25A10 ZNF750 LOC105376791 SLC16A3 SECTM1 MRPL12 DCXR FASN ANAPC11 TSPAN10 FN3K TBCD MIR6786 RAB40B TMEM105 C17orf89 P4HB B3GNTL1 MIR3186 PYCR1 FSCN2 BAHCC1 HGS WDR45B MAFG LOC101929552 LOC101929511 MAFG-AS1 RAC3 SIRT7 CCDC57 AATK-AS1 CCDC137 NPLOC4 NOTUM UTS2R GPS1 CD7 LRRC45 OGFOD3 NPB GCGR FOXK2 MIR4525 LINC00482 MIR4740 FN3KRP LOC105371925 OXLD1 AATK FAAP100 DUS1L TEX19
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	C17orf89 SLC38A10 LOC105371925 CEP131 TEPSIN AATK AATK-AS1
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	C17orf89 SLC38A10 LOC105371925 CEP131 TEPSIN
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	TMEM105 C17orf89 MIR3065 SLC38A10 MIR338 CEP131 MIR657 MIR1250 BAIAP2-AS1 LINC00482 LOC105371925 TEPSIN BAIAP2 AATK AATK-AS1
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	TMEM105 C17orf89 LINC00482 SLC38A10 TEPSIN
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	C17orf89 SLC38A10 LOC105371925 CEP131 TEPSIN AATK-AS1
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	NPLOC4 TMEM105 C17orf89 SLC38A10 ACTG1 MIR3186 CEP131 FSCN2 BAHCC1 LINC00482 MIR4740 LOC105371925 TEPSIN AATK LOC100130370 AATK-AS1 FAAP100
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	C17orf89 SLC38A10 LOC105371925 TEPSIN

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity