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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:408095 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01743209_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM3 LRRC56 SIGIRR ANO9 LOC101059906 IFITM1 B4GALNT4 PKP3 IFITM2 MIR210 PGGHG LMNTD2 MIR210HG IFITM5 PHRF1 LOC143666 CDHR5 RASSF7 PTDSS2 RNH1 IRF7 HRAS
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LRRC56 TOLLIP TALDO1 RPLP2 PDDC1 MIR210 DRD4 CHID1 LMNTD2 AP2A2 SCT CRACR2B POLR2L MUC2 MUC5B LOC143666 TSPAN4 CDHR5 CEND1 EPS8L2 HRAS MIR6744 SIGIRR PNPLA2 ANO9 DEAF1 LOC101059906 B4GALNT4 LOC171391 PKP3 MUC6 SLC25A22 CD151 LOC101927503 SNORA52 PANO1 MIR210HG PHRF1 PIDD1 TMEM80 RASSF7 PTDSS2 RNH1 IRF7 MUC5AC
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss SIGIRR ANO9 B4GALNT4 PKP3
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion SIGIRR ANO9 B4GALNT4 PTDSS2 RNH1 PKP3
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain SIGIRR ANO9 B4GALNT4 PKP3
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain IFITM3 SIGIRR ANO9 IFITM1 B4GALNT4 PKP3 ODF3 SIRT3 IFITM2 PGGHG BET1L MIR6743 IFITM5 NLRP6 RIC8A PSMD13 PTDSS2
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion SIGIRR ANO9 B4GALNT4 PTDSS2 PKP3
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LRRC56 TALDO1 RPLP2 PDDC1 MIR210 DRD4 CHID1 LMNTD2 AP2A2 SCT CRACR2B POLR2L LOC143666 TSPAN4 CDHR5 CEND1 EPS8L2 HRAS SIGIRR PNPLA2 ANO9 DEAF1 LOC101059906 B4GALNT4 LOC171391 PKP3 SLC25A22 CD151 SNORA52 PANO1 MIR210HG PHRF1 PIDD1 TMEM80 RASSF7 PTDSS2 RNH1 IRF7
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss SIGIRR PKP3

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