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See other PPT2 CNV Assays ›
Gene Symbol
PPT2
Assay Reference Genome
Location

Chr.6:32163046 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01764900_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9374

Gene Name:

 palmitoyl-protein thioesterase 2

Gene Aliases:

 C6orf8, G14, PPT-2

Location:

 Chr.6:32153452-32163681 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2 NM_001204103.1 9 1409 NP_001191032.1
NM_005155.6 9 1419 NP_005146.4
NM_138717.2 9 1198 NP_619731.2
AF020543.1 9 1364 AAB80730.1
AL110128.1 9 1126 CAB53659.1
BC001355.2 9 1233 AAH01355.1
CR533546.1 CAG38577.1
Y17958.1 9 1313 CAB46981.1

Target Gene Details

Entrez Gene ID:

 100532746

Gene Name:

 PPT2-EGFL8 readthrough (NMD candidate)

Gene Aliases:

 -

Location:

 Chr.6:32153999-32168285 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PPT2-EGFL8 NR_037861.1
AB209572.1 BAD92809.1
AF020544.1 AAB80731.1
AK290473.1
AK296648.1
AK307427.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss FKBPL AGPAT1 NOTCH4 EGFL8 TNXB PPT2-EGFL8 PPT2 MIR6833 ATF6B PBX2 PRRT1 AGER MIR6721 LOC100507547 RNF5 GPSM3
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss FKBPL HLA-DRB1 NOTCH4 EGFL8 MIR6833 ATF6B TNXA PBX2 C4A MIR6721 BTNL2 HLA-DQA2 CYP21A1P HLA-DQB1-AS1 RNF5 HLA-DQA1 AGPAT1 LOC101929163 HLA-DRB6 TNXB PPT2-EGFL8 PPT2 C6orf10 C4B CYP21A2 PRRT1 HLA-DQB2 HLA-DQB1 HCG23 HLA-DRB5 HLA-DRA MIR3135B AGER LOC100507547 GPSM3
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss FKBPL HLA-DRB1 NOTCH4 EGFL8 ATF6B TNXA PBX2 STK19 C6orf48 SLC44A4 BTNL2 SKIV2L CYP21A1P C2-AS1 ZBTB12 MIR1236 LOC101929163 PPT2-EGFL8 PPT2 C6orf10 C4B PRRT1 HLA-DQB1 HCG23 HLA-DRB5 HSPA1A LOC100507547 HSPA1B SNORD52 MIR6833 C4A MIR6721 EHMT2 CFB HLA-DQB1-AS1 RNF5 NEU1 HLA-DQA1 NELFE C2 AGPAT1 HLA-DRB6 TNXB DXO CYP21A2 HLA-DRA SNORD48 AGER GPSM3
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss FKBPL NOTCH4 EGFL8 MIR6833 ATF6B TNXA PBX2 C4A STK19 MIR6721 SKIV2L CYP21A1P C2-AS1 CFB RNF5 MIR1236 NELFE C2 AGPAT1 TNXB DXO PPT2-EGFL8 PPT2 C4B CYP21A2 PRRT1 AGER LOC100507547 GPSM3
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion FKBPL HLA-DRB1 NOTCH4 MCCD1 HCG26 EGFL8 SNORA38 SNORD84 ATF6B TNXA LST1 PBX2 STK19 MICB C6orf48 SLC44A4 LY6G6E BTNL2 SKIV2L SAPCD1 GPANK1 CYP21A1P C2-AS1 ZBTB12 MIR1236 VWA7 LSM2 DDX39B-AS1 LY6G6C ATP6V1G2 LOC101929163 C6orf47 CLIC1 PPT2-EGFL8 PPT2 TNF C6orf10 C4B PRRT1 LTA HCG23 HLA-DRB5 C6orf25 HSPA1A NFKBIL1 LY6G6D SAPCD1-AS1 ABHD16A LOC100507547 HSPA1B SNORD117 SNORD52 MIR6832 MSH5-SAPCD1 MIR6833 DDAH2 VARS ATP6V1G2-DDX39B DDX39B LOC100287329 LTB C4A MIR6721 CSNK2B EHMT2 CFB RNF5 NEU1 AIF1 NELFE C2 BAG6 HCP5 AGPAT1 HLA-DRB6 TNXB DXO NCR3 LY6G5B CYP21A2 LOC102725068 MIR4646 HLA-DRA SNORD48 HSPA1L AGER MSH5 LY6G5C PRRC2A APOM LY6G6F GPSM3
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DRB1 NOTCH4 HCG26 RING1 ATF6B PBX2 RXRB MICB SLC44A4 LY6G6E GPANK1 HLA-DQA2 HLA-DOA C2-AS1 ZBTB12 PSMB9 VWA7 LSM2 DDX39B-AS1 C6orf47 HLA-DPB2 HCG24 CLIC1 PPT2 HCG23 HLA-DRB5 SAPCD1-AS1 ABHD16A PFDN6 PSMB8-AS1 MIR219A1 HSPA1B SNORD117 SNORD52 LOC100294145 MIR6833 DDAH2 SYNGAP1 DDX39B LOC100287329 LTB MIR6721 CSNK2B SLC39A7 HLA-DMA CFB HLA-DQB1-AS1 RNF5 NELFE C2 AGPAT1 ZBTB22 B3GALT4 HLA-DRB6 TNXB NCR3 CYP21A2 LOC102725068 MIR4646 TAP1 MIR6873 HLA-DRA DAXX COL11A2 PPP1R2P1 MSH5 LY6G5C PRRC2A APOM LY6G6F GPSM3 WDR46 FKBPL MCCD1 PSMB8 EGFL8 SNORA38 SNORD84 HLA-DPB1 MIR6834 TNXA ZBTB9 LST1 STK19 RGL2 C6orf48 BTNL2 SKIV2L SAPCD1 CYP21A1P MIR1236 LY6G6C ATP6V1G2 LOC101929163 PPT2-EGFL8 TNF C6orf10 C4B PRRT1 LTA HLA-DQB1 C6orf25 MIR3135B HSPA1A NFKBIL1 LY6G6D LOC100507547 HSD17B8 HLA-DPA1 MIR6832 MSH5-SAPCD1 HLA-DOB VARS ATP6V1G2-DDX39B HCG25 CUTA C4A BRD2 EHMT2 TAP2 NEU1 HLA-DQA1 VPS52 AIF1 TAPBP BAG6 HCP5 KIFC1 RPS18 DXO LY6G5B HLA-DMB HLA-DQB2 SNORD48 PHF1 HSPA1L AGER MIR5004
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss FKBPL AGPAT1 NOTCH4 EGFL8 TNXB PPT2-EGFL8 PPT2 MIR6833 ATF6B PBX2 PRRT1 AGER MIR6721 LOC100507547 RNF5 GPSM3
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DRB1 NOTCH4 HCG26 RING1 ATF6B PBX2 RXRB MICB SLC44A4 LY6G6E GPANK1 HLA-DQA2 HLA-DOA C2-AS1 ZBTB12 PSMB9 VWA7 LSM2 DDX39B-AS1 C6orf47 HLA-DPB2 HCG24 CLIC1 PPT2 HCG23 HLA-DRB5 SAPCD1-AS1 ABHD16A PFDN6 PSMB8-AS1 MIR219A1 HSPA1B SNORD117 SNORD52 LOC100294145 MIR6833 DDAH2 SYNGAP1 DDX39B LOC100287329 LTB MIR6721 CSNK2B SLC39A7 HLA-DMA CFB HLA-DQB1-AS1 RNF5 NELFE C2 AGPAT1 ZBTB22 B3GALT4 HLA-DRB6 TNXB NCR3 CYP21A2 LOC102725068 MIR4646 TAP1 MIR6873 HLA-DRA DAXX COL11A2 PPP1R2P1 MSH5 LY6G5C PRRC2A APOM LY6G6F GPSM3 WDR46 FKBPL MCCD1 PSMB8 EGFL8 SNORA38 SNORD84 HLA-DPB1 MIR6834 TNXA ZBTB9 LST1 STK19 RGL2 C6orf48 BTNL2 SKIV2L SAPCD1 CYP21A1P MIR1236 LY6G6C ATP6V1G2 LOC101929163 PPT2-EGFL8 TNF C6orf10 C4B PRRT1 LTA HLA-DQB1 C6orf25 MIR3135B HSPA1A NFKBIL1 LY6G6D LOC100507547 HSD17B8 HLA-DPA1 MIR6832 MSH5-SAPCD1 HLA-DOB VARS ATP6V1G2-DDX39B HCG25 CUTA C4A BRD2 EHMT2 TAP2 NEU1 HLA-DQA1 VPS52 AIF1 TAPBP BAG6 HCP5 KIFC1 RPS18 DXO LY6G5B HLA-DMB HLA-DQB2 SNORD48 PHF1 HSPA1L AGER MIR5004
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss FKBPL NOTCH4 MCCD1 HCG26 EGFL8 SNORA38 SNORD84 ATF6B TNXA LST1 PBX2 STK19 MICB C6orf48 MIR6891 SLC44A4 LY6G6E BTNL2 SKIV2L SAPCD1 GPANK1 CYP21A1P C2-AS1 ZBTB12 MIR1236 VWA7 LSM2 DDX39B-AS1 LY6G6C ATP6V1G2 LOC101929163 C6orf47 CLIC1 PPT2-EGFL8 PPT2 TNF C6orf10 C4B PRRT1 LTA HCG23 C6orf25 HSPA1A NFKBIL1 LY6G6D SAPCD1-AS1 ABHD16A LOC100507547 HSPA1B HLA-B SNORD117 SNORD52 MIR6832 MSH5-SAPCD1 MIR6833 DDAH2 VARS ATP6V1G2-DDX39B DDX39B LOC100287329 LTB C4A MIR6721 CSNK2B EHMT2 CFB RNF5 NEU1 AIF1 NELFE C2 BAG6 HCP5 AGPAT1 TNXB DXO NCR3 LY6G5B CYP21A2 LOC102725068 MIR4646 HLA-DRA SNORD48 HSPA1L AGER MSH5 LY6G5C PRRC2A APOM LY6G6F GPSM3 MICA

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