Genomic Map
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Target Gene Details
Entrez Gene ID: | 3978 |
Gene Name: | DNA ligase 1 |
Gene Aliases: |
- |
Location: |
Chr.19:48115445-48170603 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 26 - Exon 27 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LIG1 | NM_000234.2 | NP_000225.1 | ||
| NM_001289063.1 | NP_001275992.1 | |||
| NM_001289064.1 | NP_001275993.1 | |||
| NM_001320970.1 | NP_001307899.1 | |||
| NM_001320971.1 | NP_001307900.1 | |||
| NR_110296.1 | ||||
| NR_135497.1 | ||||
| NR_135498.1 | ||||
| NR_135499.1 | ||||
| NR_135500.1 | ||||
| NR_135501.1 | ||||
| XM_017026809.1 | XP_016882298.1 | |||
| AB208791.1 | BAD92028.1 | |||
| AK225863.1 | ||||
| AK297296.1 | ||||
| AK300370.1 | ||||
| AK300607.1 | ||||
| AK314210.1 | ||||
| BC108318.1 | AAI08319.1 | |||
| BC110622.2 | AAI10623.1 | |||
| M36067.1 | AAA59518.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 PLA2G4C
ELSPBP1
LIG1
C19orf68
CABP5
PLA2G4C-AS1
BSPH1
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
FLT3LG
CGB3
CGB5
SEC1P
GYS1
LIG1
DBP
GRWD1
PRMT1
SNAR-A4
CA11
CGB1
SNORD32A
ZNF114
HSD17B14
ZNF473
BCAT2
MIR5088
DKKL1
SNAR-A9
KCNA7
SNAR-C1
FTL
SNAR-C4
PTH2
NOSIP
PPP1R15A
SNRNP70
BCL2L12
SNAR-G2
VRK3
SNORD35B
ELSPBP1
PLEKHA4
NTF4
PLA2G4C-AS1
SNAR-A14
RUVBL2
MIR150
KDELR1
SNAR-A8
FGF21
SNAR-C3
CGB7
IRF3
TMEM143
SNAR-A7
MED25
RPS11
LOC105372430
BAX
MAMSTR
C19orf73
SNORD33
LOC101928295
CCDC155
SNAR-C5
CGB8
PTOV1-AS2
NUCB1-AS1
SNAR-B1
SNAR-A2
ADM5
CABP5
MIR4749
SNAR-A10
SNAR-C2
FUZ
RCN3
IZUMO1
SNAR-A6
PTOV1
SNAR-A11
PRR12
KCNJ14
TBC1D17
PPFIA3
PRRG2
LOC100287477
SNORD35A
CARD8-AS1
SPACA4
PIH1D1
MIR6799
SULT2B1
SYNGR4
NUCB1
CD37
FUT1
MIR6798
GFY
NTN5
SNAR-A13
MIR4751
C19orf68
RASIP1
ATF5
SLC17A7
CYTH2
SIGLEC11
SNAR-A1
CCDC114
TULP2
RRAS
NUP62
CARD8
TRPM4
RPL13A
SNAR-A12
GRIN2D
FAM83E
LOC105447645
SNORD34
PLA2G4C
MIR4750
LIN7B
RPL18
PNKP
SNAR-B2
AKT1S1
EMP3
BSPH1
HRC
ALDH16A1
LMTK3
SPHK2
SCAF1
FUT2
FLJ26850
SIGLEC16
LOC101059948
MIR6800
SLC6A16
TSKS
TEAD2
PTOV1-AS1
LHB
SNAR-G1
SNAR-A5
FCGRT
CPT1C
CGB2
SNAR-D
MIR4324
SNAR-A3
IL4I1
DHDH
AP2A1
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
PLA2G4C
KDELR1
LIG1
C19orf68
EMP3
TMEM143
CCDC114
CARD8-AS1
CARD8
ZNF114
ELSPBP1
SYNGR4
GRIN2D
CABP5
PLA2G4C-AS1
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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