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See other NARFL CNV Assays ›
Gene Symbol
NARFL
Assay Reference Genome
Location

Chr.16:730306 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01780062_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 64428

Gene Name:

 nuclear prelamin A recognition factor like

Gene Aliases:

 HPRN, IOP1, LET1L, NAR1, PRN

Location:

 Chr.16:729753-741038 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NARFL NM_001304799.1 12 1677 NP_001291728.1
NM_022493.2 11 1595 NP_071938.1
AK025641.1 11 1554 BAB15199.1
AK025861.1 9 1294 BAB15261.1
AK056467.1 10 2672
AK094812.1 3 2279
AK095675.1 9 1940
AK126151.1 2 2409
AK223005.1 11 1554 BAD96725.1
AY129231.1 11 1548 AAM98737.1
BC030248.1 11 1547 AAH30248.1
BC129940.1 6 1476
BU741568.1 1 568

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss CCDC78 FAM173A MCRIP2 METTL26 RAB40C STUB1 RHOT2 LOC105371038 FBXL16 HAGHL LOC100287175 NARFL METRN WDR90 WDR24 LOC105371184 RHBDL1 JMJD8 WFIKKN1
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain CCDC78 FAM173A MCRIP2 METTL26 STUB1 RHOT2 LOC105371038 FBXL16 HAGHL LOC100287175 NARFL METRN WDR90 WDR24 LOC105371184 RHBDL1 JMJD8 WFIKKN1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication CACNA1H LOC105371046 RAB40C LOC101929280 SSTR5-AS1 BRICD5 RAB26 LOC105371049 TPSD1 CEMP1 LINC00235 NUBP2 DECR2 TBL3 MAPK8IP3 ZNF598 HAGH HS3ST6 ABCA3 MIR5587 MPG AMDHD2 FLJ42627 TPSAB1 NPW STUB1 MSLN CLCN7 NPRL3 MIR4717 SNHG19 SLC9A3R2 PKD1 TBC1D24 SNHG9 PIGQ RGS11 C16orf59 MIR4516 TSR3 WDR24 TSC2 LOC729652 TPSG1 LOC106660606 MIR3677 RNPS1 HBA2 FAM173A TELO2 POLR3K HAGHL LOC100134368 NARFL RPL23AP5 NTHL1 HBQ1 NTN3 DNASE1L2 LOC652276 LOC107984876 MIR662 SNORA78 MRPL28 MIR3180-5 TMEM204 GNPTG WASIR2 MCRIP2 LINC00254 PDIA2 RPS2 LOC105371045 C16orf91 LMF1-AS1 PTX4 METRN NME4 LOC105371184 RHBDL1 CCNF UBE2I SYNGR3 MIR6767 HN1L PRSS29P LMF1 ERVK13-1 NOXO1 ATP6V0C ARHGDIG TPSB2 TRAF7 SNORD60 CHTF18 MIR6511B1 MIR940 RAB11FIP3 PGP EME2 NDUFB10 DDX11L10 MIR6859-4 RHOT2 GNG13 MIR3177 FBXL16 PRSS27 HBA1 LOC105371047 BAIAP3 IGFALS WDR90 SPSB3 MIR3176 JMJD8 WFIKKN1 HBZ SSTR5 CCDC154 METTL26 SNORA10 NME3 MIR1225 RPL3L NHLRC4 SNRNP25 SNORA64 KCTD5 AXIN1 FAHD1 C1QTNF8 GFER PRR25 IFT140 CRAMP1 ECI1 MLST8 PRR35 MEIOB CCDC78 CAPN15 ABCA17P RHBDF1 LOC105371038 MIR3178 LOC100287175 HBM CASKIN1 LUC7L E4F1 MRPS34 LOC107987233 FAM234A RPUSD1 UNKL MSRB1 SOX8 MIR6768 TMEM8A PDPK1 RNF151
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss CCDC78 FAM173A STUB1 MSLN RHOT2 FBXL16 HAGHL NARFL METRN WDR90 WDR24 LOC105371184 RHBDL1 JMJD8
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss CCDC78 FAM173A MCRIP2 STUB1 MSLN RHOT2 GNG13 LOC105371038 FBXL16 HAGHL LOC100287175 NARFL CHTF18 METRN WDR90 RPUSD1 WDR24 LOC105371184 RHBDL1 MIR662 JMJD8
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss FAM173A METTL26 RAB40C LOC101929280 LINC00235 NHLRC4 HAGHL NARFL CHTF18 RAB11FIP3 MIR5587 MIR662 PRR25 PRR35 CCDC78 MCRIP2 CAPN15 STUB1 MSLN RHOT2 GNG13 LOC105371038 FBXL16 LOC100287175 LOC107987233 PIGQ METRN WDR90 RPUSD1 WDR24 LOC105371184 RHBDL1 MIR3176 JMJD8 WFIKKN1
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss CCDC78 METRN FAM173A STUB1 MSLN WDR24 FBXL16 HAGHL JMJD8 NARFL
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss FAM173A METTL26 RAB40C LOC101929280 LINC00235 NHLRC4 HAGHL NARFL CHTF18 RAB11FIP3 MIR5587 MIR662 PRR25 PRR35 CCDC78 MCRIP2 CAPN15 STUB1 MSLN RHOT2 GNG13 LOC105371038 FBXL16 LOC100287175 LOC107987233 PIGQ METRN WDR90 RPUSD1 WDR24 LOC105371184 RHBDL1 MIR3176 JMJD8 WFIKKN1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LMF1 SSTR5 FAM173A METTL26 RAB40C LOC101929280 SSTR5-AS1 LINC00235 NHLRC4 HAGHL NARFL CHTF18 RAB11FIP3 C1QTNF8 MIR5587 LOC107984876 MIR662 PRR25 PRR35 CCDC78 MCRIP2 CAPN15 STUB1 MSLN RHOT2 GNG13 LOC105371038 FBXL16 LOC100287175 LMF1-AS1 LOC107987233 PIGQ METRN WDR90 RPUSD1 SOX8 WDR24 LOC105371184 RHBDL1 MIR3176 JMJD8 WFIKKN1
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss CCDC78 FAM173A MCRIP2 METTL26 RAB40C LOC101929280 STUB1 RHOT2 LOC105371038 FBXL16 HAGHL LOC100287175 NARFL PIGQ METRN WDR90 WDR24 LOC105371184 RHBDL1 JMJD8 WFIKKN1
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication FAM173A METTL26 RAB40C LOC101929280 HAGHL NARFL CHTF18 MIR662 CCDC78 MCRIP2 STUB1 MSLN RHOT2 GNG13 LOC105371038 FBXL16 LOC100287175 PIGQ METRN WDR90 RPUSD1 WDR24 LOC105371184 RHBDL1 JMJD8 WFIKKN1
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication FAM173A METTL26 RAB40C LOC101929280 LINC00235 NHLRC4 HAGHL NARFL CHTF18 RAB11FIP3 MIR5587 MIR662 PRR25 PRR35 CCDC78 MCRIP2 CAPN15 STUB1 MSLN RHOT2 GNG13 LOC105371038 FBXL16 LOC100287175 LOC107987233 PIGQ METRN WDR90 RPUSD1 WDR24 LOC105371184 RHBDL1 MIR3176 JMJD8 WFIKKN1

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