Hs01834239_cn

• Gene Symbol: RITA1
• Assay Reference Genome Location: Chr.12:113191499 on build GRCh38
• Cytoband: 12q24.13

Target Gene Details

• Entrez Gene ID: 84934
• Gene Name: RBPJ interacting and tubulin associated 1
• Gene Aliases: C12orf52, RITA
• Location: Chr.12:113185526-113192368 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RITA1	NM_001286215.1	3	1052	NP_001273144.1
	NM_032848.2	4	1184	NP_116237.1
	XM_005253972.2	4	1156	XP_005254029.1
	AK027733.1	4	960	BAB55328.1
	AK027741.1			BAB55333.1
	AK075358.1	4	1150	BAC11568.1
	AK123762.1	5	1055
	AK222908.1	4	931	BAD96628.1
	AY007158.1	4	972
	BC022092.2	4	715	AAH22092.1
	BX366456.2	3	842

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv519540	Chr.12:113042705 - 113459599 on Build GRCh38	Gain+Loss	DDX54 TPCN1 CFAP73 MIR6762 MIR7106 DTX1 SLC8B1 SDSL SDS RASAL1 PLBD2 RITA1 IQCD
esv3892265	Chr.12:113099321 - 113527932 on Build GRCh38	Gain	LHX5-AS1 DDX54 TPCN1 CFAP73 MIR6762 MIR7106 SLC8B1 SDSL SDS RASAL1 PLBD2 LHX5 RITA1 IQCD
esv3630792	Chr.12:112988703 - 113838810 on Build GRCh38	Gain	LHX5-AS1 DDX54 RBM19 TPCN1 OAS2 CFAP73 MIR6762 MIR7106 LINC01234 DTX1 SLC8B1 SDSL SDS RASAL1 PLBD2 LHX5 RITA1 IQCD

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
Notch signaling pathway
neurogenesis
negative regulation of Notch signaling pathway
nuclear export

Function(s)

protein binding
tubulin binding