Hs01839263_cn

• Gene Symbol: SYS1
• Assay Reference Genome Location: Chr.20:45375076 on build GRCh38
• Cytoband: 20q13.12

Target Gene Details

• Entrez Gene ID: 90196
• Gene Name: Sys1 golgi trafficking protein
• Gene Aliases: C20orf169, dJ453C12.4, dJ453C12.4.1
• Location: Chr.20:45361937-45376802 on Build GRCh38
• Assay Gene Location: Within Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SYS1	NM_001099791.2	4	1232	NP_001093261.1
	AK172738.1	4	1199

Target Gene Details

• Entrez Gene ID: 767557
• Gene Name: SYS1-DBNDD2 readthrough (NMD candidate)
• Gene Aliases: C20orf169-DBNDD2
• Location: Chr.20:45363169-45410610 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SYS1-DBNDD2	NR_003189.2
	BI199175.1
	DN994280.1

Target Gene Details

• Entrez Gene ID: 27296
• Gene Name: TP53 target 5
• Gene Aliases: C20orf10, CLG01
• Location: Chr.20:45373880-45378550 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TP53TG5	NM_014477.2			NP_055292.1
	XM_011528790.2			XP_011527092.1
	AB017802.1			BAA76405.1
	AK295308.1
	BC036785.1			AAH36785.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1056102	Chr.20:44673341 - 45636248 on Build GRCh38	Loss	SYS1 KCNK15-AS1 WISP2 DBNDD2 SEMG2 TOMM34 SDC4 WFDC2 KCNS1 STK4-AS1 WFDC12 EPPIN-WFDC6 TP53TG5 RBPJL WFDC5 EPPIN MIR6812 PABPC1L MATN4 WFDC10A YWHAB PIGT SPINT3 STK4 KCNK15 SEMG1 RIMS4 SYS1-DBNDD2 WFDC6 WFDC9 WFDC8 SLPI PI3

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein targeting to Golgi
Golgi to endosome transport
Golgi to plasma membrane protein transport
negative regulation of cell growth
intracellular signal transduction

Function(s)

molecular_function