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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147212479 on build GRCh38
Cytoband
1q21.1
Assay ID Hs01868257_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 5 943 NP_001138301.1
NM_001144830.2 4 1153 NP_001138302.1
NM_001461.3 5 933 NP_001452.2
XM_005272946.4 5 907 XP_005273003.1
XM_005272947.4 5 651 XP_005273004.1
XM_005272948.4 5 634 XP_005273005.1
XM_006711244.3 5 923 XP_006711307.1
XM_006711245.3 5 923 XP_006711308.1
XM_011509350.2 5 938 XP_011507652.1
XM_011509351.2 4 670 XP_011507653.1
XM_017000801.1 4 682 XP_016856290.1
XM_017000802.1 4 452 XP_016856291.1
AK022172.1 4 1143 BAB13975.1
AK222728.1 5 648 BAD96448.1
AK225739.1 5 658
AK314647.1 5 861
BC035687.1 4 826 AAH35687.1
L37080.1 5 619 AAA67849.1
Z47553.1 5 625 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain GJA8 RNVU1-1 RNVU1-3 PDE4DIP LINC01138 NBPF11 NBPF14 GJA5 NOTCH2NL RNVU1-6 LOC100996517 LOC100505824 LOC105371242 MIR6077 RNVU1-8 MIR5087 BCL9 LOC100996763 GPR89B ACP6 LOC105371226 RNVU1-7 LOC284561 LOC101927468 NBPF12 PRKAB2 NBPF10 CH17-408M7.1 HYDIN2 LINC00624 NUDT4P1 PDZK1P1 LOC101928979 LOC728989 CHD1L PDIA3P1 NUDT4P2 FMO5 NBPF13P PPIAL4G RNU1-13P LOC100132057
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss PDZK1 PDE4DIP LINC01138 NBPF14 TXNIP RNVU1-6 LOC100505824 LOC105371242 PIAS3 MIR5087 BCL9 LOC100996763 GPR89B ACP6 ITGA10 RNVU1-7 RNF115 LOC101927468 PEX11B CH17-408M7.1 HYDIN2 NUDT4P1 POLR3C CD160 POLR3GL LOC101928979 GNRHR2 LIX1L CHD1L NUDT4P2 FMO5 PPIAL4G GJA8 RNVU1-1 RNVU1-3 HFE2 RBM8A NBPF11 GJA5 NOTCH2NL LOC100996517 MIR6077 RNVU1-8 LOC105371226 GPR89A ANKRD34A ANKRD35 LOC284561 NBPF12 PRKAB2 NBPF10 MIR6736 LINC00624 NUDT17 PDZK1P1 LOC728989 PDIA3P1 NBPF13P RNU1-13P LOC100132057
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss GJA8 RNVU1-1 RNVU1-3 PDE4DIP LINC01138 NBPF11 NBPF14 GJA5 NOTCH2NL LOC100996517 LOC100505824 LOC105371242 MIR6077 RNVU1-8 MIR5087 BCL9 LOC100996763 GPR89B ACP6 LOC105371226 RNVU1-7 LOC284561 LOC101927468 NBPF12 PRKAB2 NBPF10 CH17-408M7.1 HYDIN2 LINC00624 NUDT4P1 PDZK1P1 LOC728989 CHD1L PDIA3P1 NUDT4P2 FMO5 NBPF13P PPIAL4G RNU1-13P LOC100132057
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion GJA8 RNVU1-1 RNVU1-3 HFE2 PDE4DIP LINC01138 NBPF11 NBPF14 TXNIP GJA5 NOTCH2NL RNVU1-6 LOC100996517 LOC100505824 LOC105371242 MIR6077 RNVU1-8 MIR5087 BCL9 LOC100996763 GPR89B ACP6 LOC105371226 ANKRD34A RNVU1-7 LOC284561 LOC101927468 NBPF12 PRKAB2 NBPF10 CH17-408M7.1 HYDIN2 LINC00624 NUDT4P1 PDZK1P1 POLR3GL LOC101928979 LOC728989 LIX1L CHD1L PDIA3P1 NUDT4P2 FMO5 NBPF13P PPIAL4G RNU1-13P LOC100132057
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication GJA8 RNVU1-1 RNVU1-3 PDE4DIP LINC01138 NBPF11 NBPF14 GJA5 NOTCH2NL LOC100996517 LOC100505824 LOC105371242 MIR6077 RNVU1-8 MIR5087 BCL9 LOC100996763 GPR89B ACP6 LOC105371226 RNVU1-7 LOC284561 LOC101927468 NBPF12 PRKAB2 CH17-408M7.1 HYDIN2 LINC00624 NUDT4P1 PDZK1P1 LOC728989 CHD1L PDIA3P1 NUDT4P2 FMO5 NBPF13P PPIAL4G RNU1-13P LOC100132057
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain GJA8 RNVU1-1 RNVU1-3 PDE4DIP LINC01138 NBPF11 NBPF14 GJA5 NOTCH2NL RNVU1-6 LOC100996517 LOC100505824 LOC105371242 MIR6077 RNVU1-8 MIR5087 BCL9 LOC100996763 GPR89B ACP6 LOC105371226 RNVU1-7 LOC284561 LOC101927468 NBPF12 PRKAB2 NBPF10 CH17-408M7.1 HYDIN2 LINC00624 NUDT4P1 PDZK1P1 LOC101928979 LOC728989 CHD1L PDIA3P1 NUDT4P2 FMO5 NBPF13P PPIAL4G RNU1-13P LOC100132057
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion GJA8 RNVU1-1 RNVU1-3 PDE4DIP LINC01138 NBPF11 NBPF14 GJA5 NOTCH2NL LOC100996517 LOC100505824 LOC105371242 MIR6077 RNVU1-8 MIR5087 NBPF9 BCL9 LOC100996763 GPR89B ACP6 LOC105371226 RNVU1-7 LOC284561 LOC101927468 NBPF12 PRKAB2 NBPF10 CH17-408M7.1 HYDIN2 LINC00624 NUDT4P1 PDZK1P1 LOC101928979 LOC728989 CHD1L PDIA3P1 NUDT4P2 FMO5 NBPF13P PPIAL4G RNU1-13P LOC100132057
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L PDIA3P1 FMO5 PRKAB2

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