Genomic Map
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Target Gene Details
Entrez Gene ID: | 587 |
Gene Name: | branched chain amino acid transaminase 2 |
Gene Aliases: |
BCAM, BCATM, BCT2, PP18 |
Location: |
Chr.19:48795062-48811063 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| BCAT2 | NM_001164773.1 | NP_001158245.1 | ||
| NM_001190.3 | NP_001181.2 | |||
| NM_001284325.1 | NP_001271254.1 | |||
| AF268047.1 | AAK38368.1 | |||
| AF268048.1 | AAK38369.1 | |||
| AK093627.1 | ||||
| AK223522.1 | BAD97242.1 | |||
| BC001900.1 | AAH01900.1 | |||
| BC004243.1 | AAH04243.2 | |||
| BE139200.1 | ||||
| CA310873.1 | ||||
| CB049110.1 | ||||
| U62739.1 | AAB53087.1 | |||
| U68418.1 | AAB67672.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
 DBP
SEC1P
SIGLEC11
SNRNP70
CARD8-AS1
RCN3
SLC6A16
LIG1
CARD8
SPACA4
RPS11
SNAR-C1
SIGLEC16
PIH1D1
NUCB1-AS1
LOC101059948
PTOV1
PPFIA3
NTF4
CGB3
SLC17A7
MAMSTR
SNAR-A13
SNORD35B
FUT2
SNAR-A3
SULT2B1
MED25
MIR6798
SNAR-A5
PTOV1-AS2
RASIP1
CGB7
C19orf73
SNAR-C2
PRRG2
MIR6799
SNAR-A2
GYS1
SNAR-A12
TBC1D17
SNAR-D
FTL
FCGRT
CGB1
PTH2
CCDC114
SNAR-A8
CYTH2
SNAR-A6
SNAR-C3
ADM5
AP2A1
MIR5088
SNORD32A
BSPH1
GRIN2D
PLA2G4C-AS1
SYNGR4
RPL13A
NTN5
GFY
CPT1C
RPL18
FUZ
CABP5
SNAR-A14
TSKS
FLT3LG
MIR6800
PLEKHA4
GRWD1
NUP62
PRMT1
IRF3
IL4I1
CGB2
KCNA7
KDELR1
SNORD33
TMEM143
MIR4751
SNAR-A9
FAM83E
BCL2L12
FUT1
CGB5
C19orf68
DKKL1
VRK3
SNAR-C4
ZNF473
HRC
LHB
CGB8
SCAF1
SNAR-A11
ELSPBP1
SNAR-A4
PNKP
PTOV1-AS1
PPP1R15A
RUVBL2
CA11
ATF5
SNAR-B2
TULP2
LMTK3
SNAR-G1
AKT1S1
LOC105447645
SNAR-A10
ALDH16A1
SNAR-B1
TRPM4
PLA2G4C
NOSIP
DHDH
LOC101928295
SNAR-G2
MIR150
LOC100287477
SNAR-A1
FLJ26850
SNAR-A7
MIR4750
IZUMO1
SNORD35A
MIR4324
FGF21
BCAT2
ZNF114
CD37
PRR12
SNAR-C5
RRAS
CCDC155
LOC105372430
SPHK2
TEAD2
LIN7B
EMP3
NUCB1
SNORD34
BAX
KCNJ14
MIR4749
HSD17B14
|
| esv3644600 | Chr.19:48793369 - 48795744 on Build GRCh38 | Loss |
BCAT2
|
| esv2677313 | Chr.19:48793367 - 48795729 on Build GRCh38 | Deletion |
BCAT2
|
| nsv833855 | Chr.19:48750098 - 48949781 on Build GRCh38 | Loss |
BCAT2
NUCB1-AS1
DHDH
NUCB1
PPP1R15A
FUT1
PLEKHA4
FGF21
TULP2
HSD17B14
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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