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See other GJC2 CNV Assays ›
Gene Symbol
GJC2
Assay Reference Genome
Location

Chr.1:228158808 on build GRCh38
Cytoband
1q42.13
Assay ID Hs01922820_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57165

Gene Name:

 gap junction protein gamma 2

Gene Aliases:

 CX46.6, Cx47, GJA12, HLD2, LMPH1C, PMLDAR, SPG44

Location:

 Chr.1:228149714-228159826 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GJC2 NM_020435.3 2 1363 NP_065168.2
AY285161.1 1 1041 AAP37488.1
BC089439.1 2 1363 AAH89439.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952137 Chr.1:228140600 - 228182899 on Build GRCh38 Deletion IBA57-AS1 GJC2 IBA57 GUK1
nsv1160102 Chr.1:228081212 - 228239280 on Build GRCh38 Deletion MIR3620 IBA57-AS1 C1orf145 OBSCN GJC2 MRPL55 IBA57 C1orf35 GUK1 ARF1
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain MIR3620 TRIM17 RNF187 LOC107985355 HIST3H2A IBA57 LOC101927401 MIR5008 WNT9A PRSS38 LOC105373289 OBSCN TRIM11 LOC100506571 JMJD4 MIR4666A WNT3A GJC2 ARF1 HIST3H2BB MIR6742 HIST3H3 IBA57-AS1 C1orf145 LOC101060022 MRPL55 C1orf35 GUK1 SNAP47
nsv827031 Chr.1:228156381 - 228162089 on Build GRCh38 Gain GJC2
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain TRIM17 LOC107985355 RNA5S8 HIST3H2A IBA57 RNA5S5 PRSS38 OBSCN RNA5S9 JMJD4 MIR4666A WNT3A RNA5S12 ARF1 RNA5S6 HIST3H2BB MIR3620 RNA5S17 RNA5S3 RNF187 RHOU LOC101927401 MIR5008 WNT9A BTNL10 DUSP5P1 LOC105373289 RNA5S7 RNA5S15 RNA5S11 RNA5S14 TRIM11 LOC100506571 LOC105373132 RNA5S16 GJC2 RNA5S13 MIR6742 RNA5S10 RNA5S2 HIST3H3 RNA5S1 IBA57-AS1 C1orf145 RNA5S4 LOC101060022 MRPL55 C1orf35 GUK1 SNAP47
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss TRIM11 TRIM17 MIR4666A HIST3H2A GJC2 IBA57 LOC101927401 HIST3H2BB MIR6742 HIST3H3 IBA57-AS1 C1orf145 OBSCN GUK1
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss MIR3620 TRIM17 RNF187 LOC107985355 HIST3H2A IBA57 LOC101927401 MIR5008 WNT9A OBSCN TRIM11 LOC100506571 MIR4666A WNT3A GJC2 ARF1 HIST3H2BB MIR6742 HIST3H3 IBA57-AS1 C1orf145 LOC101060022 MRPL55 C1orf35 GUK1
dgv839n54 Chr.1:228139958 - 228183397 on Build GRCh38 Loss IBA57-AS1 GJC2 IBA57 GUK1
nsv549291 Chr.1:228151238 - 228163073 on Build GRCh38 Loss GJC2
nsv549290 Chr.1:228145951 - 228162105 on Build GRCh38 Loss GJC2 GUK1
dgv105n67 Chr.1:228157036 - 228160245 on Build GRCh38 Gain GJC2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Function(s) Process(es)


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