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See other KLHL17 CNV Assays ›
Gene Symbol
KLHL17
Assay Reference Genome
Location

Chr.1:965056 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01941455_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339451

Gene Name:

 kelch like family member 17

Gene Aliases:

 -

Location:

 Chr.1:960103-965719 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KLHL17 NM_198317.2 12 1901 NP_938073.1
XM_006710600.3 12 2454 XP_006710663.1
AK127585.1 11 1548
AY423763.1 12 1901 AAR03710.1
BC105742.1 9 1404
CA432461.1 1 681

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain HES4 LOC284600 LOC100130417 LOC100288175 PERM1 AGRN KLHL17 ISG15 LOC107985728 RNF223 PLEKHN1 NOC2L C1orf159 LOC105378948 SAMD11
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss PRKCZ MIR6859-1 UBE2J2 LOC100506504 B3GALT6 MMP23A AURKAIP1 GNB1 LOC148413 C1orf159 LOC105378948 LINC00115 TNFRSF4 MIR6808 DVL1 MIR6727 TNFRSF18 LOC100133331 SDF4 LOC729737 CALML6 KLHL17 TMEM88B TMEM240 GABRD LOC105378591 CDK11A MIR200B ANKRD65 MIB2 LOC100288175 LOC107985728 NADK FAM41C LOC107984841 MIR200A ATAD3A FAM132A TTLL10 LOC102725121 SAMD11 SKI ACAP3 LOC100130417 LOC102724312 MIR6726 MTND1P23 NOC2L MIR6859-2 CCNL2 CPSF3L MIR429 PUSL1 LOC100134822 MMP23B LOC100287934 MXRA8 MIR6723 LOC284600 MTND2P28 FAM138A FNDC10 SSU72 PERM1 ATAD3B SLC35E2B RNF223 LOC100288069 LOC107985729 TTLL10-AS1 MRPL20 LOC101928626 WASH7P TAS1R3 LINC01128 OR4F29 DDX11L1 CPTP MIR1302-2 ATAD3C SCNN1D LOC105378949 SLC35E2 PLEKHN1 CDK11B LOC100129534 CFAP74 LOC105378592 TMEM52 LINC01342 AGRN VWA1 LOC105378947 MORN1 LOC100132287 FAM87B FAAP20 HES4 OR4F16 OR4F5 ISG15 LOC105378589
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion HES4 LOC284600 LOC100130417 LOC100288175 PERM1 AGRN KLHL17 ISG15 LOC107985728 RNF223 PLEKHN1 NOC2L C1orf159 LOC105378948 SAMD11
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC107985728 PLEKHN1 NOC2L LOC284600 LOC100130417 SAMD11 PERM1 KLHL17
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC284600 LINC01342 LOC100288175 PERM1 AGRN LOC107985728 RNF223 FAM41C TTLL10-AS1 MIR200A TTLL10 C1orf159 LOC105378948 SAMD11 TNFRSF4 HES4 TNFRSF18 LOC100130417 SDF4 KLHL17 ISG15 PLEKHN1 NOC2L MIR429 MIR200B
nsv482036 Chr.1:960587 - 965715 on Build GRCh38 Gain KLHL17
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss PUSL1 MMP23B LOC100287934 MXRA8 UBE2J2 LOC284600 FNDC10 SSU72 PERM1 ATAD3B SLC35E2B RNF223 LOC100288069 B3GALT6 MMP23A AURKAIP1 LOC107985729 LOC148413 TTLL10-AS1 MRPL20 C1orf159 LOC105378948 TAS1R3 LINC00115 TNFRSF4 LINC01128 MIR6808 DVL1 MIR6727 TNFRSF18 CPTP SDF4 ATAD3C SCNN1D KLHL17 TMEM88B SLC35E2 PLEKHN1 TMEM240 CDK11B CDK11A MIR200B ANKRD65 LINC01342 MIB2 LOC100288175 AGRN VWA1 LOC107985728 NADK FAM41C MIR200A ATAD3A FAM132A TTLL10 SAMD11 FAM87B HES4 ACAP3 LOC100130417 LOC102724312 MIR6726 ISG15 NOC2L CCNL2 CPSF3L MIR429
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC100287934 MIR6723 LOC284600 MTND2P28 LOC100288175 PERM1 AGRN LOC107985728 RNF223 LOC105378947 LOC100288069 FAM41C LOC107984841 C1orf159 LOC105378948 LOC101928626 SAMD11 LINC00115 FAM87B LINC01128 HES4 OR4F16 LOC100133331 LOC100130417 KLHL17 ISG15 MTND1P23 PLEKHN1 NOC2L
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss UBE2J2 LOC284600 LINC01342 LOC100288175 PERM1 AGRN LOC107985728 RNF223 B3GALT6 FAM41C TTLL10-AS1 MIR200A FAM132A TTLL10 C1orf159 LOC105378948 SAMD11 LINC00115 FAM87B TNFRSF4 LINC01128 HES4 TNFRSF18 LOC100130417 SDF4 KLHL17 ISG15 PLEKHN1 NOC2L MIR429 MIR200B
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain HES4 LINC01342 LOC100288175 PERM1 AGRN KLHL17 ISG15 RNF223 PLEKHN1 NOC2L C1orf159 LOC105378948 SAMD11
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion HES4 TNFRSF18 LINC01342 SDF4 LOC100288175 PERM1 AGRN KLHL17 ISG15 RNF223 PLEKHN1 NOC2L TTLL10-AS1 MIR200A TTLL10 C1orf159 LOC105378948 SAMD11 MIR429 MIR200B TNFRSF4
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss ISG15 LOC107985728 HES4 PLEKHN1 NOC2L LOC284600 LOC100130417 SAMD11 PERM1 AGRN KLHL17
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain PUSL1 MXRA8 ANKRD65 UBE2J2 LOC284600 LINC01342 LOC100288175 PERM1 AGRN LOC107985728 RNF223 B3GALT6 AURKAIP1 LOC148413 TTLL10-AS1 MIR200A MRPL20 FAM132A TTLL10 C1orf159 LOC105378948 SAMD11 TAS1R3 TNFRSF4 MIR6808 HES4 DVL1 ACAP3 MIR6727 TNFRSF18 CPTP LOC100130417 SDF4 SCNN1D KLHL17 TMEM88B MIR6726 ISG15 PLEKHN1 NOC2L CCNL2 CPSF3L MIR429 MIR200B
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC107985728 HES4 PLEKHN1 FAM41C NOC2L LOC284600 LOC100130417 SAMD11 PERM1 KLHL17 LINC01128

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More Information


Additional Information:

For this assay, SNP(s) [rs115741058] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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