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See other TJP1 CNV Assays ›
Gene Symbol
TJP1
Assay Reference Genome
Location

Chr.15:29708849 on build GRCh38
Cytoband
15q13.1
Assay ID Hs01969760_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 7082

Gene Name:

 tight junction protein 1

Gene Aliases:

 ZO-1

Location:

 Chr.15:29699367-29968919 on Build GRCh38

Assay Gene Location:

 Within Exon 30
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TJP1 NM_001301025.1 26 4799 NP_001287954.1
NM_001301026.1 25 4574 NP_001287955.1
NM_003257.4 25 5035 NP_003248.3
NM_175610.3 24 4795 NP_783297.2
XM_005254617.3 26 4919 XP_005254674.2
XM_005254618.3 25 4666 XP_005254675.1
XM_005254619.3 25 4679 XP_005254676.2
XM_005254620.3 25 4679 XP_005254677.2
XM_011521972.2 26 4919 XP_011520274.2
XM_017022521.1 27 4970 XP_016878010.1
XM_017022522.1 27 4970 XP_016878011.1
XM_017022523.1 27 4970 XP_016878012.1
XM_017022524.1 26 4730 XP_016878013.1
XM_017022525.1 26 4732 XP_016878014.1
XM_017022526.1 26 4717 XP_016878015.1
XM_017022527.1 26 4758 XP_016878016.1
XM_017022528.1 25 4681 XP_016878017.1
XM_017022529.1 25 4666 XP_016878018.1
XM_017022530.1 24 4426 XP_016878019.1
XM_017022531.1 27 4800 XP_016878020.1
AB370197.1 24 4539
AK302971.1 6 1600
AK304758.1 25 4666
BC111712.1 25 4937 AAI11713.1
BX640879.1 25 4575 CAE45936.1
CR749235.1 17 3328 CAH18091.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss WHAMMP2 GOLGA8T ULK4P3 LOC100130111 GOLGA8M FAM189A1 PDCD6IPP2 GOLGA8J GOLGA6L7P LOC101060569 DKFZP434L187 LOC105370746 LOC105370751 CHRFAM7A NSMCE3 TJP1 GOLGA8R LOC100289656 APBA2 LOC107984752
nsv832945 Chr.15:29640395 - 29831518 on Build GRCh38 Gain LOC100130111 TJP1
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain WHAMMP2 LOC100130111 NSMCE3 TJP1 LOC100289656 FAM189A1 PDCD6IPP2 APBA2 GOLGA6L7P LOC107984752
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss GOLGA8T ULK4P3 FAM189A1 PDCD6IPP2 GOLGA8J LOC100288637 LOC100996413 DKFZP434L187 LOC105370746 LOC105370751 TJP1 LOC100289656 ARHGAP11B APBA2 LOC107984752 WHAMMP2 ULK4P2 LOC100130111 LOC101927579 GOLGA6L7P LOC101060569 CHRFAM7A NSMCE3 GOLGA8R GOLGA8H
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain WHAMMP2 GOLGA8T ULK4P3 LOC100130111 FAM189A1 PDCD6IPP2 GOLGA8J GOLGA6L7P NSMCE3 TJP1 LOC100289656 APBA2 LOC107984752
nsv568675 Chr.15:29035149 - 29916451 on Build GRCh38 Gain LOC100130111 NSMCE3 TJP1 FAM189A1 APBA2
nsv832944 Chr.15:29568858 - 29789854 on Build GRCh38 Gain+Loss LOC100130111 TJP1 FAM189A1

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