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See other BRICD5 CNV Assays ›
Gene Symbol
BRICD5
Assay Reference Genome
Location

Chr.16:2209266 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02006845_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 283870

Gene Name:

 BRICHOS domain containing 5

Gene Aliases:

 C16orf79

Location:

 Chr.16:2209253-2213037 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BRICD5 NM_182563.3 NP_872369.2
XM_005255263.4 XP_005255320.1
BC039154.2 AAH39154.1

Target Gene Details

Entrez Gene ID:

 64223

Gene Name:

 MTOR associated protein, LST8 homolog

Gene Aliases:

 GBL, GbetaL, LST8, POP3, WAT1

Location:

 Chr.16:2205177-2209417 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MLST8 NM_001199173.1 9 1731 NP_001186102.1
NM_001199174.1 9 1570 NP_001186103.1
NM_001199175.1 9 1758 NP_001186104.1
NM_022372.4 9 1761 NP_071767.3
XM_005255475.3 9 1537 XP_005255532.2
XM_005255478.2 9 1742 XP_005255535.1
XM_005255479.2 9 1669 XP_005255536.1
XM_017023548.1 9 1726 XP_016879037.1
XM_017023549.1 9 1467 XP_016879038.1
XM_017023551.1 9 1776 XP_016879040.1
AF195883.1 6 1082 AAF04308.1
AI933692.1 1 171
AK021536.1 9 1730
AK022227.1 8 1415 BAB13990.1
AK098762.1 9 1666
AK123195.1 2 1536
AY223837.1 8 1571 AAO73410.1
BC001313.2 9 1451 AAH01313.1
BC017119.1 8 1462 AAH17119.1
BC052292.1 8 1985 AAH52292.1
BC088354.1 9 1479 AAH88354.1
BQ014640.1 1 167

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571200 Chr.16:2209190 - 2244889 on Build GRCh38 Loss BRICD5 DNASE1L2 ECI1 MLST8 PGP E4F1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC652276 TSC2 MEIOB SOX8 LOC107984876 PDIA2 CCDC78 HAGHL LINC00254 LOC101929280 RPL3L ZNF598 DDX11L10 MIR3178 RGS11 HBA1 RHBDF1 MIR6859-4 HBQ1 LOC105371046 TPSG1 BRICD5 RPL23AP5 RPS2 IGFALS UBE2I FBXL16 ECI1 CASKIN1 MIR1225 EME2 PTX4 PRSS29P TELO2 C1QTNF8 TMEM204 METTL26 HN1L HBA2 ARHGDIG LINC00235 MIR6767 LOC107987233 IFT140 CCNF TSR3 ABCA3 LOC106660606 PRSS27 LOC105371045 HS3ST6 MAPK8IP3 FAM173A LMF1-AS1 ABCA17P NHLRC4 MRPS34 DECR2 SSTR5-AS1 LOC105371047 NOXO1 MSLN NDUFB10 WDR24 RPUSD1 MCRIP2 LOC105371184 METRN UNKL C16orf91 ERVK13-1 LOC100134368 CAPN15 C16orf59 FAHD1 HBM GNG13 RNPS1 SNHG19 LOC100287175 MIR6511B1 NME3 LOC729652 MRPL28 CEMP1 MIR3677 NTHL1 GNPTG KCTD5 MSRB1 WASIR2 CACNA1H SSTR5 NPRL3 WFIKKN1 NTN3 DNASE1L2 TPSB2 TBC1D24 MIR3180-5 HAGH CLCN7 MLST8 ATP6V0C LUC7L AMDHD2 NME4 GFER CHTF18 SNRNP25 SYNGR3 RHBDL1 MPG SNHG9 STUB1 FLJ42627 MIR662 FAM234A CCDC154 PRR25 BAIAP3 HBZ TMEM8A CRAMP1 PGP LOC105371049 MIR3176 NPW RNF151 RHOT2 POLR3K PDPK1 NUBP2 TRAF7 AXIN1 RAB11FIP3 PIGQ E4F1 LMF1 SNORD60 PRR35 MIR5587 MIR6768 MIR3177 SNORA10 SPSB3 JMJD8 RAB40C SNORA78 LOC105371038 NARFL MIR4717 SNORA64 TPSAB1 RAB26 TBL3 PKD1 WDR90 TPSD1 SLC9A3R2 MIR4516 MIR940
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss SNHG19 TSC2 MIR6511B1 PGP LOC105371049 MIR3677 ABCA3 LOC106660606 NPW NTHL1 ZNF598 TRAF7 E4F1 SNORD60 BRICD5 DNASE1L2 MIR3180-5 ECI1 MLST8 NOXO1 CASKIN1 MIR1225 GFER MIR4717 SYNGR3 RAB26 TBL3 PKD1 RNPS1 SLC9A3R2 MIR4516 MIR940
dgv4861n54 Chr.16:2083900 - 2246850 on Build GRCh38 Loss SNHG19 SNORD60 TSC2 BRICD5 MIR6511B1 DNASE1L2 MIR3180-5 ECI1 MLST8 PGP CASKIN1 LOC105371049 MIR1225 RAB26 TRAF7 PKD1 E4F1 MIR4516
dgv4863n54 Chr.16:2141733 - 2274302 on Build GRCh38 Loss SNHG19 SNORD60 BRICD5 DNASE1L2 ECI1 MLST8 PGP CASKIN1 MIR3677 LOC106660606 RAB26 TRAF7 RNPS1 E4F1 MIR940
nsv1711 Chr.16:2199093 - 2232650 on Build GRCh38 Insertion BRICD5 MLST8 PGP E4F1
nsv457351 Chr.16:2156590 - 2274302 on Build GRCh38 Loss LOC106660606 BRICD5 DNASE1L2 TRAF7 ECI1 MLST8 RNPS1 PGP E4F1 CASKIN1 MIR3677 MIR940
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain SNHG19 LOC652276 TSC2 MIR6767 MIR6511B1 LOC729652 CEMP1 PGP LOC105371049 MIR3677 CCNF ABCA3 LOC106660606 MIR3178 PDPK1 TRAF7 E4F1 ABCA17P SNORD60 BRICD5 NTN3 DNASE1L2 MIR6768 TBC1D24 MIR3180-5 ECI1 MLST8 ATP6V0C CASKIN1 MIR1225 AMDHD2 MIR4717 C16orf59 RAB26 PKD1 RNPS1 MIR4516 MIR940
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion SNHG19 SNORD60 BRICD5 DNASE1L2 ECI1 MLST8 PGP CASKIN1 MIR3677 ABCA3 LOC106660606 MIR4717 RAB26 TRAF7 RNPS1 E4F1 MIR940

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