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See other PRSS38 CNV Assays ›
Gene Symbol
PRSS38
Assay Reference Genome
Location

Chr.1:227817393 on build GRCh38
Cytoband
1q42.13
Assay ID Hs02045584_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339501

Gene Name:

 protease, serine 38

Gene Aliases:

 MPN2

Location:

 Chr.1:227815708-227846470 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRSS38 NM_183062.2 3 496 NP_898885.1
XM_011544175.2 3 505 XP_011542477.1
XM_011544176.2 3 505 XP_011542478.1
BC130400.1 3 568

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv549273 Chr.1:227808265 - 227863533 on Build GRCh38 Loss PRSS38
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain HIST3H2BB TRIM17 MIR5008 IBA57 JMJD4 HIST3H2A LOC100506571 C1orf35 RNF187 OBSCN MRPL55 HIST3H3 LOC107985355 PRSS38 LOC101060022 GJC2 IBA57-AS1 WNT3A SNAP47 MIR6742 MIR3620 TRIM11 LOC101927401 ARF1 MIR4666A C1orf145 GUK1 LOC105373289 WNT9A
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain RNA5S11 MIR5008 RNA5S13 HIST3H2A C1orf35 RNA5S12 RNF187 HIST3H3 LOC107985355 LOC105373132 DUSP5P1 GJC2 IBA57-AS1 RNA5S7 WNT3A MIR6742 MIR3620 RNA5S5 RNA5S9 RHOU RNA5S15 LOC105373289 RNA5S3 RNA5S1 WNT9A HIST3H2BB TRIM17 IBA57 JMJD4 LOC100506571 OBSCN MRPL55 PRSS38 LOC101060022 RNA5S16 RNA5S17 SNAP47 RNA5S4 RNA5S14 TRIM11 RNA5S2 BTNL10 LOC101927401 ARF1 RNA5S8 MIR4666A C1orf145 GUK1 RNA5S10 RNA5S6
nsv998933 Chr.1:227805227 - 227871595 on Build GRCh38 Loss PRSS38
nsv549272 Chr.1:227748061 - 227858047 on Build GRCh38 Loss SNAP47 PRSS38 LOC105373289

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More Information


Additional Information:

For this assay, SNP(s) [rs74588116] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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