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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1773741 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02058750_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 NP_001244299.1
XM_017023025.1 XP_016878514.1
XM_017023026.1 XP_016878515.1
AK074080.2 BAB84906.2
EF452422.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MAPK8IP3 NUBP2 NME3 MRPS34 EME2 MIR3177 SPSB3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PKD1 POLR3K SYNGR3 TPSAB1 NTHL1 MIR6767 SPSB3 JMJD8 MIR3178 UNKL PRSS29P MLST8 C16orf91 TSC2 MEIOB PGP WDR90 MIR6859-4 GNG13 CLCN7 ECI1 KCTD5 NPRL3 NUBP2 ABCA3 BRICD5 LOC105371184 NPW SOX8 MCRIP2 GFER STUB1 CHTF18 SNORA78 RGS11 RPL23AP5 PRSS27 PIGQ LOC100287175 C16orf59 RAB26 TMEM204 PTX4 SLC9A3R2 CACNA1H TPSD1 HBQ1 MSRB1 NME4 FAM173A DECR2 UBE2I WASIR2 ZNF598 RAB11FIP3 LOC652276 MIR6768 NTN3 LOC105371045 C1QTNF8 CASKIN1 TELO2 SSTR5-AS1 TRAF7 NHLRC4 CCDC78 RHOT2 METRN FAHD1 MRPS34 RHBDF1 LOC100134368 HAGHL FBXL16 NOXO1 LINC00254 LOC107984876 LOC105371047 ARHGDIG PRR35 WFIKKN1 MIR3177 CCDC154 PDIA2 MIR3677 LMF1 TSR3 LOC105371046 HAGH RAB40C PDPK1 LOC105371049 RHBDL1 LINC00235 SNORA64 AXIN1 TPSG1 RNF151 LOC106660606 RPL3L E4F1 LOC729652 MAPK8IP3 IFT140 TMEM8A LOC107987233 RPUSD1 SNHG9 DDX11L10 MIR940 TBC1D24 ERVK13-1 MIR3180-5 AMDHD2 CRAMP1 MIR6511B1 LMF1-AS1 TPSB2 MIR3176 TBL3 RNPS1 MIR662 SNORA10 SSTR5 HBZ MIR4516 MRPL28 NDUFB10 LUC7L NARFL MIR5587 BAIAP3 LOC101929280 CEMP1 METTL26 HBA1 ATP6V0C HS3ST6 MIR1225 NME3 MSLN SNORD60 SNHG19 ABCA17P SNRNP25 CCNF RPS2 MIR4717 FLJ42627 HN1L PRR25 EME2 CAPN15 MPG WDR24 GNPTG FAM234A DNASE1L2 IGFALS LOC105371038 HBA2 HBM
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss MAPK8IP3 NUBP2 NME3 MRPS34 EME2 IGFALS HAGH SPSB3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MAPK8IP3 NUBP2 NME3 MRPS34 EME2 MIR3177 IGFALS SPSB3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MAPK8IP3 NUBP2 NME3 MRPS34 EME2 IGFALS SPSB3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MAPK8IP3 IFT140 NME3 MIR3177 LOC105371046 HAGH SPSB3 CRAMP1 HN1L NUBP2 MRPS34 EME2 IGFALS
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MAPK8IP3 NUBP2 NME3 MRPS34 EME2 IGFALS SPSB3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MAPK8IP3 IFT140 NME3 LOC105371047 MEIOB MIR3177 TELO2 LOC105371046 HAGH TMEM204 SPSB3 CRAMP1 HN1L NUBP2 FAHD1 MRPS34 EME2 IGFALS
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MAPK8IP3 NUBP2 NME3 MRPS34 EME2 IGFALS SPSB3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MAPK8IP3 NME3 MRPS34 EME2 SPSB3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MAPK8IP3 NME3 MEIOB MIR3177 HAGH SPSB3 CRAMP1 HN1L NUBP2 FAHD1 MRPS34 EME2 IGFALS
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MAPK8IP3 NUBP2 NME3 MRPS34 EME2 IGFALS SPSB3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MAPK8IP3 NUBP2 NME3 FAHD1 MRPS34 EME2 MIR3177 IGFALS HAGH SPSB3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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