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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1296440 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02077700_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_005244717.3 XP_005244774.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 MIR6726 ACAP3 SCNN1D
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss UBE2J2 MIR6726 FAM132A B3GALT6 ACAP3 SDF4 SCNN1D
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss OR4F5 TMEM52 PRKCZ OR4F16 WASH7P TMEM240 MIR429 MIR6726 FAM132A CPTP MIR1302-2 LOC100132287 GABRD LOC105378592 LOC107985728 HES4 LOC100133331 GNB1 KLHL17 LOC105378591 LOC100288069 NOC2L CPSF3L ATAD3A MIR6727 MTND2P28 SCNN1D LOC100287934 TAS1R3 MRPL20 MMP23B TNFRSF4 ISG15 MIR200A UBE2J2 C1orf159 MIB2 MIR6723 TTLL10-AS1 SAMD11 TNFRSF18 LOC100130417 MMP23A LOC105378589 LOC105378948 DVL1 OR4F29 SKI LINC00115 ACAP3 SLC35E2 LOC100134822 PUSL1 CDK11A TTLL10 ANKRD65 LINC01128 MXRA8 SDF4 LOC100506504 MIR200B TMEM88B LINC01342 FAM87B FAM41C DDX11L1 CCNL2 CFAP74 AURKAIP1 NADK LOC100129534 MTND1P23 MIR6808 CALML6 VWA1 MORN1 MIR6859-1 FNDC10 LOC107985729 AGRN LOC148413 LOC729737 CDK11B LOC102724312 LOC100288175 FAM138A B3GALT6 LOC102725121 SLC35E2B LOC105378949 MIR6859-2 RNF223 ATAD3C PERM1 LOC107984841 LOC105378947 LOC284600 SSU72 PLEKHN1 LOC101928626 FAAP20 ATAD3B
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6727 MIR6808 PUSL1 MIR6726 TAS1R3 CPTP ACAP3 CPSF3L DVL1
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss MIR6727 MIR6808 PUSL1 MIR6726 TAS1R3 AURKAIP1 CPTP MXRA8 ACAP3 SCNN1D CPSF3L DVL1
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR6727 MIR6808 ACAP3 SCNN1D MIR429 PUSL1 MIR6726 FAM132A TAS1R3 TTLL10 CPTP MXRA8 B3GALT6 TNFRSF4 SDF4 MIR200A UBE2J2 C1orf159 MIR200B RNF223 LINC01342 TTLL10-AS1 AURKAIP1 TNFRSF18 CPSF3L DVL1
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6727 MIR6808 PUSL1 MIR6726 TAS1R3 AURKAIP1 CPTP MXRA8 ACAP3 SCNN1D CPSF3L DVL1
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6727 ACAP3 SCNN1D MIR429 PUSL1 MIR6726 FAM132A AGRN TAS1R3 TTLL10 CPTP LOC100288175 B3GALT6 TNFRSF4 SDF4 MIR200A UBE2J2 C1orf159 MIR200B RNF223 LINC01342 TTLL10-AS1 TNFRSF18 LOC105378948 CPSF3L
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LINC00115 ACAP3 TMEM240 SLC35E2 MIR429 PUSL1 MIR6726 CDK11A FAM132A TTLL10 ANKRD65 CPTP LINC01128 MXRA8 SDF4 MIR200B LOC107985728 TMEM88B HES4 LINC01342 FAM87B FAM41C CCNL2 KLHL17 AURKAIP1 NADK LOC100288069 NOC2L CPSF3L ATAD3A MIR6727 MIR6808 VWA1 SCNN1D FNDC10 LOC107985729 LOC100287934 AGRN TAS1R3 MRPL20 MMP23B LOC148413 CDK11B LOC102724312 LOC100288175 B3GALT6 TNFRSF4 SLC35E2B ISG15 MIR200A UBE2J2 C1orf159 MIB2 RNF223 ATAD3C PERM1 TTLL10-AS1 SAMD11 LOC284600 TNFRSF18 LOC100130417 SSU72 MMP23A PLEKHN1 LOC105378948 DVL1 ATAD3B
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6727 MIR6808 PUSL1 MIR6726 TAS1R3 CPTP MXRA8 ACAP3 SCNN1D CPSF3L DVL1
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR6727 MIR6808 VWA1 ACAP3 SCNN1D TMEM240 FNDC10 MIR429 LOC107985729 PUSL1 MIR6726 FAM132A TAS1R3 MRPL20 MMP23B LOC148413 TTLL10 ANKRD65 CPTP CDK11B LOC102724312 MXRA8 B3GALT6 TNFRSF4 SDF4 MIR200A UBE2J2 C1orf159 MIR200B TMEM88B MIB2 ATAD3C LINC01342 CCNL2 TTLL10-AS1 AURKAIP1 TNFRSF18 SSU72 CPSF3L DVL1 ATAD3B ATAD3A
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6727 UBE2J2 MIR6808 ACAP3 SCNN1D PUSL1 MIR6726 TAS1R3 AURKAIP1 CPTP MXRA8 CPSF3L DVL1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6727 MIR6808 ACAP3 SCNN1D MIR429 PUSL1 MIR6726 FAM132A AGRN TAS1R3 MRPL20 LOC148413 TTLL10 ANKRD65 CPTP LOC100288175 MXRA8 B3GALT6 TNFRSF4 SDF4 ISG15 MIR200A UBE2J2 C1orf159 MIR200B LOC107985728 TMEM88B RNF223 HES4 LINC01342 PERM1 CCNL2 TTLL10-AS1 KLHL17 SAMD11 LOC284600 AURKAIP1 TNFRSF18 LOC100130417 PLEKHN1 NOC2L LOC105378948 CPSF3L DVL1
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6727 UBE2J2 MIR200B ACAP3 SCNN1D MIR429 TTLL10-AS1 PUSL1 MIR6726 FAM132A TNFRSF18 TTLL10 B3GALT6 TNFRSF4 SDF4 CPSF3L MIR200A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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