Hs02096266_cn

• Gene Symbol: KCNT1
• Assay Reference Genome Location: Chr.9:135714627 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 57582
• Gene Name: potassium sodium-activated channel subfamily T member 1
• Gene Aliases: EIEE14, ENFL5, KCa4.1, SLACK, Slo2.2, bA100C15.2
• Location: Chr.9:135700807-135793147 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KCNT1	NM_001272003.1			NP_001258932.1
	NM_020822.2			NP_065873.2
	XM_011518877.2			XP_011517179.1
	XM_011518878.2			XP_011517180.1
	XM_011518879.2			XP_011517181.1
	AB037843.1
	AK127272.1
	BC136618.1
	BC171770.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831756	Chr.9:135648434 - 135835577 on Build GRCh38	Loss	CAMSAP1 KCNT1 LCN9 SOHLH1
dgv12991n54	Chr.9:135689001 - 135752357 on Build GRCh38	Loss	KCNT1 SOHLH1
nsv1145271	Chr.9:135714154 - 135715054 on Build GRCh38	Deletion	KCNT1
nsv517335	Chr.9:135655608 - 135803389 on Build GRCh38	Loss	KCNT1 LCN9 SOHLH1
dgv954n27	Chr.9:135698139 - 135761806 on Build GRCh38	Loss	KCNT1 SOHLH1
nsv469914	Chr.9:135667037 - 135789055 on Build GRCh38	Loss	KCNT1 LCN9 SOHLH1
dgv12992n54	Chr.9:135689825 - 135725457 on Build GRCh38	Loss	KCNT1 SOHLH1
nsv469915	Chr.9:135699384 - 135739808 on Build GRCh38	Gain	KCNT1 SOHLH1
nsv951201	Chr.9:135647755 - 135770054 on Build GRCh38	Deletion	KCNT1 LCN9 SOHLH1
nsv825171	Chr.9:135693613 - 135767026 on Build GRCh38	Gain	KCNT1 SOHLH1
nsv1075690	Chr.9:135714453 - 135714854 on Build GRCh38	Deletion	KCNT1
nsv615927	Chr.9:135714078 - 135738597 on Build GRCh38	Loss	KCNT1
dgv12994n54	Chr.9:135711894 - 135789055 on Build GRCh38	Gain	KCNT1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

potassium ion transmembrane transport

Function(s)

voltage-gated potassium channel activity
calcium-activated potassium channel activity