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See other TRPT1 CNV Assays ›
Gene Symbol
TRPT1
Assay Reference Genome
Location

Chr.11:64224151 on build GRCh38
Cytoband
11q13.1
Assay ID Hs02104652_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 83707

Gene Name:

 tRNA phosphotransferase 1

Gene Aliases:

 -

Location:

 Chr.11:64223799-64226254 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPT1 NM_001033678.3 NP_001028850.2
NM_001160389.1 NP_001153861.1
NM_001160390.1 NP_001153862.1
NM_001160392.1 NP_001153864.1
NM_001160393.1 NP_001153865.1
NM_031472.3 NP_113660.1
XM_005274345.4 XP_005274402.1
XM_005274346.4 XP_005274403.1
XM_005274347.4 XP_005274404.1
XM_006718706.3 XP_006718769.1
XM_006718707.3 XP_006718770.1
XM_017018400.1 XP_016873889.1
XM_017018401.1 XP_016873890.1
AK026364.1
AY211494.1 AAO62941.1
BC005133.2 AAH05133.1
BM982538.1
BQ672032.1
BQ674339.1
DR004975.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1159904 Chr.11:64150129 - 64279169 on Build GRCh38 Deletion STIP1 DNAJC4 FERMT3 LOC105369340 GPR137 BAD FKBP2 VEGFB TRPT1 PPP1R14B MACROD1 NUDT22 PLCB3
nsv951010 Chr.11:63942829 - 64352128 on Build GRCh38 Deletion STIP1 DNAJC4 MIR7155 TRMT112 VEGFB MACROD1 NUDT22 ESRRA FERMT3 NAA40 LOC105369340 GPR137 TEX40 FLRT1 BAD OTUB1 KCNK4 FKBP2 CCDC88B KCNK4-TEX40 TRPT1 PPP1R14B PRDX5 PLCB3 COX8A
dgv1963n54 Chr.11:64174262 - 64329761 on Build GRCh38 Loss STIP1 DNAJC4 FERMT3 LOC105369340 GPR137 TEX40 TRMT112 BAD KCNK4 FKBP2 VEGFB KCNK4-TEX40 TRPT1 PPP1R14B NUDT22 PRDX5 PLCB3 ESRRA
nsv555187 Chr.11:64185649 - 64260416 on Build GRCh38 Loss STIP1 DNAJC4 FERMT3 FKBP2 VEGFB TRPT1 PPP1R14B LOC105369340 NUDT22 PLCB3
nsv832186 Chr.11:64204788 - 64402587 on Build GRCh38 Loss DNAJC4 MIR1237 FERMT3 RPS6KA4 MIR7155 LOC105369340 GPR137 TEX40 TRMT112 BAD KCNK4 FKBP2 CCDC88B VEGFB KCNK4-TEX40 TRPT1 PPP1R14B NUDT22 PRDX5 PLCB3 ESRRA
nsv555184 Chr.11:64156974 - 64275525 on Build GRCh38 Loss STIP1 DNAJC4 FERMT3 LOC105369340 GPR137 BAD FKBP2 VEGFB TRPT1 PPP1R14B MACROD1 NUDT22 PLCB3
nsv469961 Chr.11:64055468 - 64318495 on Build GRCh38 Loss STIP1 DNAJC4 FERMT3 LOC105369340 GPR137 TEX40 TRMT112 FLRT1 BAD KCNK4 FKBP2 VEGFB KCNK4-TEX40 TRPT1 PPP1R14B MACROD1 NUDT22 PRDX5 PLCB3 ESRRA

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Function(s) Process(es)


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