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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144041045 on build GRCh38
Cytoband
8q24.3
Assay ID Hs02117050_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 3 1346 NP_001127846.1
NM_198572.2 3 1346 NP_940974.2
XM_011517021.1 3 1346 XP_011515323.1
XM_011517022.2 3 1632 XP_011515324.1
XM_011517023.2 3 2650 XP_011515325.1
XM_011517024.2 4 1871 XP_011515326.1
XM_011517025.2 3 2306 XP_011515327.1
XM_017013399.1 4 1165 XP_016868888.1
AB092352.1 3 1334 BAD08232.1
AK301710.1 3 1334
BC050390.1 3 1336 AAH50390.1
BC053547.1 3 1321 AAH53547.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss MAF1 MIR6846 WDR97 OPLAH SHARPIN HGH1 GPAA1 SMPD5 MIR6847 SPATC1 CYC1 EXOSC4 MROH1
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss MIR661 SCX MIR1234 PPP1R16A MAF1 MIR6846 LOC101928953 LRRC14 MIR6848 CPSF1 SLC39A4 CYHR1 FBXL6 MIR6893 MIR7112 SLC52A2 VPS28 KIFC2 TONSL-AS1 SPATC1 GRINA EXOSC4 RECQL4 FOXH1 PLEC DGAT1 LOC101928902 BOP1 TMEM249 WDR97 OPLAH SCRT1 SHARPIN HGH1 MIR6849 GPAA1 MIR939 SMPD5 MFSD3 MIR6847 PARP10 HSF1 ADCK5 CYC1 GPT MROH1 TONSL
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SPATC1 SMPD5
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss MIR661 SCX MIR1234 PPP1R16A MAF1 MIR6846 LOC101928953 LRRC14 MIR6848 CPSF1 SLC39A4 CYHR1 FBXL6 MIR6893 MIR7112 SLC52A2 VPS28 KIFC2 TONSL-AS1 SPATC1 GRINA EXOSC4 RECQL4 FOXH1 PLEC DGAT1 LOC101928902 BOP1 TMEM249 WDR97 OPLAH SCRT1 SHARPIN HGH1 MIR6849 GPAA1 MIR939 SMPD5 MFSD3 MIR6847 PARP10 HSF1 ADCK5 CYC1 GPT MROH1 TONSL
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss MAF1 MIR6846 WDR97 OPLAH SHARPIN GPAA1 SMPD5 MIR6847 PARP10 SPATC1 CYC1 GRINA EXOSC4 PLEC
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss MIR661 MAF1 MIR6846 WDR97 OPLAH SHARPIN HGH1 GPAA1 SMPD5 MIR6847 PARP10 SPATC1 CYC1 GRINA EXOSC4 MROH1 PLEC EPPK1
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion MIR661 MAF1 MIR6846 WDR97 OPLAH SHARPIN GPAA1 SMPD5 MIR6847 PARP10 SPATC1 CYC1 GRINA EXOSC4 PLEC EPPK1
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion MIR661 NRBP2 PUF60 MIR6846 OPLAH LOC642574 SCRIB SMPD5 MIR6847 PARP10 MIR6845 SPATC1 GRINA MIR937 EXOSC4 PLEC EPPK1
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain MIR661 MIR6847 MIR6846 OPLAH PARP10 SPATC1 CYC1 GRINA EXOSC4 GPAA1 PLEC SMPD5
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain MIR661 MAF1 MIR6846 WDR97 OPLAH SHARPIN GPAA1 SMPD5 MIR6847 PARP10 SPATC1 CYC1 GRINA EXOSC4 PLEC
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss MIR661 MIR6847 MIR6846 OPLAH PARP10 SPATC1 GRINA EXOSC4 GPAA1 PLEC SMPD5

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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