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See other SNRNP200 CNV Assays ›
Gene Symbol
SNRNP200
Assay Reference Genome
Location

Chr.2:96278611 on build GRCh38
Cytoband
2q11.2
Assay ID Hs02118721_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 23020

Gene Name:

 small nuclear ribonucleoprotein U5 subunit 200

Gene Aliases:

 ASCC3L1, BRR2, HELIC2, RP33, U5-200KD

Location:

 Chr.2:96274336-96321893 on Build GRCh38

Assay Gene Location:

 Within Exon 40
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNRNP200 NM_014014.4 38 5556 NP_054733.2
XM_017003603.1 40 6386 XP_016859092.1
AB018331.2 36 5094 BAA34508.2
AF085356.1 8 1398 AAD40191.1
AF119874.1 2 129 AAF69628.1
AK023840.1 32 4567 BAB14698.1
AK024391.1 32 4637 BAB14906.1
AK026662.1 6 678
AK090671.1 BAC03499.1
AK303465.1 9 1393
AK303663.1 9 1245
AL831994.1 29 4272
AY572488.1 38 5502 AAS78571.1
BC001417.2 4 500 AAH01417.4
BC007577.1 20 2940 AAH07577.1
BC065924.1 31 4479 AAH65924.1
BC112891.1 32 4677
BC131784.1 8 1088

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834305 Chr.2:96183160 - 96353738 on Build GRCh38 Gain STARD7 SNRNP200 CIAO1 TMEM127 LOC105373495 ITPRIPL1 STARD7-AS1 NCAPH
nsv508155 Chr.2:96268957 - 96472565 on Build GRCh38 Deletion SNRNP200 CIAO1 LOC105373495 ITPRIPL1 NCAPH
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion LOC105373496 ANKRD36C FAHD2B ANKRD36B LOC100506076 ITPRIPL1 ANKRD23 LMAN2L GPAT2 FAM178B ANKRD39 ARID5A ADRA2B LOC653924 FER1L5 SEMA4C DUSP2 KANSL3 ASTL ANKRD36 NCAPH NEURL3 STARD7 SNRNP200 CNNM3 CIAO1 LOC107984110 STARD7-AS1 TMEM127 LOC105373495 LOC100506123 LOC101927053 CNNM4 FAHD2CP MIR3127
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion LOC105373496 ANKRD36C FAHD2B ANKRD36B LOC100506076 ITPRIPL1 ANKRD23 LMAN2L GPAT2 FAM178B ANKRD39 ARID5A ADRA2B LOC653924 FER1L5 SEMA4C DUSP2 KANSL3 ASTL ANKRD36 NCAPH NEURL3 STARD7 SNRNP200 CNNM3 CIAO1 LOC107984110 STARD7-AS1 TMEM127 LOC105373495 LOC100506123 LOC101927053 CNNM4 FAHD2CP MIR3127
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication LOC105373496 ANKRD36C FAHD2B ANKRD36B LOC100506076 ITPRIPL1 ANKRD23 LMAN2L GPAT2 FAM178B ANKRD39 ARID5A ADRA2B LOC653924 FER1L5 SEMA4C DUSP2 KANSL3 ASTL ANKRD36 NCAPH NEURL3 STARD7 SNRNP200 CNNM3 CIAO1 LOC107984110 STARD7-AS1 TMEM127 LOC105373495 LOC100506123 LOC101927053 CNNM4 FAHD2CP MIR3127

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