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Gene Symbol
PIDD1
Assay Reference Genome
Location

Chr.11:802247 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02127289_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55367

Gene Name:

 p53-induced death domain protein 1

Gene Aliases:

 LRDD, PIDD

Location:

 Chr.11:799179-809504 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIDD1 NM_145886.3 6 1271 NP_665893.2
NM_145887.3 6 1271 NP_665894.2
XM_005253005.4 7 2209 XP_005253062.1
XM_005253006.4 7 1772 XP_005253063.1
XM_005253007.3 6 1289 XP_005253064.1
XM_005253008.4 7 2269 XP_005253065.1
XM_011520209.2 6 1507 XP_011518511.1
XM_011520210.2 7 2209 XP_011518512.1
XM_011520211.2 7 2209 XP_011518513.1
XM_011520212.1 6 1349 XP_011518514.1
XM_011520213.2 4 491 XP_011518515.1
XM_017017993.1 3 703 XP_016873482.1
AB208832.1 4 2075 BAD92069.1
AB208949.1 4 2039 BAD92186.1
AB209529.1 4 2181 BAD92766.1
AF229178.1 5 1473 AAF69491.1
AF274972.1 6 1267 AAG13461.1
AF465246.1 3 651 AAP97716.1
AK074893.1 3 274 BAC11272.1
AL833849.1 3 507 CAD38708.1
BC014904.1 5 1209 AAH14904.1
BQ924290.1 3 544
BX349115.2 4 624

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CD151 PANO1 CHID1 PIDD1 SNORA52 SLC25A22 LOC171391 RPLP2 PNPLA2 PDDC1 TSPAN4 POLR2L CEND1 CRACR2B
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CD151 AP2A2 LOC101927503 MUC5AC PIDD1 MUC6 TMEM80 TOLLIP MUC2 LOC171391 PTDSS2 RNH1 PNPLA2 LOC143666 PDDC1 PKP3 TSPAN4 SCT DRD4 EPS8L2 DEAF1 TALDO1 HRAS IRF7 PHRF1 CDHR5 MUC5B LOC101059906 PANO1 CHID1 LMNTD2 SNORA52 MIR6744 MIR210HG SLC25A22 RPLP2 SIGIRR B4GALNT4 POLR2L LRRC56 CEND1 RASSF7 MIR210 CRACR2B ANO9
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CD151 AP2A2 PANO1 CHID1 PIDD1 SNORA52 SLC25A22 LOC171391 RPLP2 PNPLA2 PDDC1 TSPAN4 POLR2L CEND1 CRACR2B
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CD151 AP2A2 LOC101927503 MUC5AC PIDD1 MUC6 TMEM80 TOLLIP MUC2 LOC171391 PTDSS2 RNH1 PNPLA2 LOC143666 PDDC1 TSPAN4 SCT DRD4 EPS8L2 DEAF1 TALDO1 HRAS IRF7 PHRF1 CDHR5 MUC5B LOC101059906 PANO1 CHID1 LMNTD2 SNORA52 MIR6744 MIR210HG SLC25A22 RPLP2 SIGIRR POLR2L LRRC56 CEND1 RASSF7 MIR210 CRACR2B TOLLIP-AS1 ANO9
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CD151 PANO1 CHID1 PIDD1 SNORA52 SLC25A22 LOC171391 RPLP2 PNPLA2 PDDC1 TSPAN4 POLR2L CEND1 CRACR2B
nsv552870 Chr.11:743813 - 810882 on Build GRCh38 Loss RPLP2 PDDC1 PANO1 PIDD1 CEND1 TALDO1 SLC25A22 LOC171391
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CD151 AP2A2 PIDD1 TMEM80 LOC171391 PTDSS2 RNH1 PNPLA2 LOC143666 PDDC1 PKP3 TSPAN4 SCT DRD4 EPS8L2 DEAF1 TALDO1 HRAS IRF7 PHRF1 CDHR5 LOC101059906 PANO1 CHID1 LMNTD2 SNORA52 MIR210HG SLC25A22 RPLP2 SIGIRR B4GALNT4 POLR2L LRRC56 CEND1 RASSF7 MIR210 CRACR2B ANO9
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain RPLP2 PNPLA2 CD151 PDDC1 PANO1 PIDD1 CEND1 SNORA52 CRACR2B SLC25A22 LOC171391
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CD151 PIDD1 TMEM80 LOC171391 PTDSS2 RNH1 PNPLA2 LOC143666 PDDC1 TSPAN4 SCT DRD4 EPS8L2 DEAF1 TALDO1 HRAS IRF7 PHRF1 CDHR5 LOC101059906 PANO1 CHID1 LMNTD2 SNORA52 MIR210HG SLC25A22 RPLP2 POLR2L LRRC56 CEND1 RASSF7 MIR210 CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CD151 PANO1 CHID1 PIDD1 SNORA52 SLC25A22 LOC171391 RPLP2 PNPLA2 PDDC1 TSPAN4 POLR2L CEND1 TALDO1 CRACR2B

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More Information


Additional Information:

For this assay, SNP(s) [rs112955474] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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