Hs02137634_cn

• Gene Symbol: DHX38
• Assay Reference Genome Location: Chr.16:72093778 on build GRCh38
• Cytoband: 16q22.2

Target Gene Details

• Entrez Gene ID: 9785
• Gene Name: DEAH-box helicase 38
• Gene Aliases: DDX38, PRP16, PRPF16
• Location: Chr.16:72093665-72112912 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DHX38	NM_014003.3	1	63	NP_054722.2
	XM_005256269.1			XP_005256326.1
	XM_011523484.1			XP_011521786.1
	XM_011523485.1	1	114	XP_011521787.1
	XM_017023913.1			XP_016879402.1
	BG719187.1	1	70

Target Gene Details

• Entrez Gene ID: 54957
• Gene Name: thioredoxin like 4B
• Gene Aliases: DLP, Dim2
• Location: Chr.16:72044261-72094316 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TXNL4B	NM_001142317.1	1	92	NP_001135789.1
	NM_001142318.1			NP_001135790.1
	CD517462.1
	DA499499.1	1	92

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2758654	Chr.16:71942441 - 72240448 on Build GRCh38	Gain	PKD1L3 DHODH DHX38 HPR PMFBP1 TXNL4B HP
esv2714683	Chr.16:71950823 - 72151945 on Build GRCh38	Deletion	PKD1L3 DHODH DHX38 HPR PMFBP1 TXNL4B HP
dgv3017n100	Chr.16:72040933 - 72757730 on Build GRCh38	Gain	DHX38 HPR LOC107984814 PMFBP1 TXNL4B HP LINC01572
nsv833273	Chr.16:71937902 - 72118955 on Build GRCh38	Loss	PKD1L3 DHODH DHX38 HPR PMFBP1 TXNL4B HP

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA helicase, oxidoreductase

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
RNA export from nucleus
mRNA export from nucleus
mRNA 3'-end processing
spliceosomal complex assembly
cell cycle

Function(s)

ATP-dependent RNA helicase activity
protein binding
ATP binding
poly(A) RNA binding