Hs02143691_cn

• Gene Symbol: PGAP3
• Assay Reference Genome Location: Chr.17:39671502 on build GRCh38
• Cytoband: 17q12

Target Gene Details

• Entrez Gene ID: 93210
• Gene Name: post-GPI attachment to proteins 3
• Gene Aliases: AGLA546, CAB2, PERLD1, PP1498, hCOS16
• Location: Chr.17:39671122-39688070 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PGAP3	NM_001291726.1	7	2167	NP_001278655.1
	NM_001291728.1	7	2257	NP_001278657.1
	NM_001291730.1	6	1978	NP_001278659.1
	NM_001291732.1	5	1915	NP_001278661.1
	NM_001291733.1	4	1853	NP_001278662.1
	NM_033419.4	8	2320	NP_219487.3
	XM_011525480.2	7	2102	XP_011523782.1
	XM_011525481.2	9	2449	XP_011523783.1
	AB088396.1	8	2272	BAC55580.1
	AF217980.1	5	1715	AAG17223.1
	AK057911.1	8	2628
	AK075473.1	1	495
	AK075474.1	7	2154	BAC11642.1
	AL833198.1	1	1018
	AY358437.1	8	2296	AAQ88803.1
	BC010652.1	8	2281	AAH10652.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv528093	Chr.17:39657827 - 39709752 on Build GRCh38	Loss	PGAP3 STARD3 TCAP PNMT ERBB2
nsv516757	Chr.17:39625596 - 39678288 on Build GRCh38	Loss	PGAP3 STARD3 TCAP PPP1R1B PNMT
nsv574991	Chr.17:39613752 - 39674782 on Build GRCh38	Loss	PGAP3 STARD3 TCAP PPP1R1B PNMT
dgv40n68	Chr.17:39536627 - 39726611 on Build GRCh38	Loss	NEUROD2 PGAP3 STARD3 TCAP PPP1R1B PNMT CDK12 MIR4728 ERBB2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

GPI anchor metabolic process
GPI anchor biosynthetic process

Function(s)

hydrolase activity, acting on ester bonds