Hs02146512_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81246527 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	2807	NP_001033073.1
	XM_005257019.1	17	2925	XP_005257076.1
	XM_011524288.1	17	2946	XP_011522590.1
	XM_011524289.1	16	2922	XP_011522591.1
	XM_011524290.1	15	2201	XP_011522592.1
	BU552914.1	1	144

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	TEPSIN SLC38A10 C17orf89
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	ACTG1 MIR3186 NPLOC4 LOC107985022 C17orf89 MRPL12 SLC25A10 LOC107985021 OXLD1 LOC105371921 TEPSIN LINC00482 LOC105371925 MIR1250 LOC101928855 LOC400627 HGS ARL16 MIR6786 FSCN2 BAHCC1 BAIAP2 SLC38A10 BAIAP2-AS1 TMEM105 LOC100129503 FAAP100 AATK-AS1 MIR3065 LOC100130370 AATK TSPAN10 CHMP6 RPTOR CCDC137 CEP131 PDE6G MIR338 MIR657 MIR4740
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	ACTG1 MIR3186 LOC105371944 NPLOC4 TEX19 C17orf89 PPP1R27 NARF GPS1 LINC00482 LOC105376790 LOC105371925 MCRIP1 ARL16 HEXDC MIR6786 BAHCC1 CCDC57 STRA13 RAC3 LOC105376791 SIRT7 WDR45B FN3K UTS2R AATK-AS1 PCYT2 MIR4525 ANAPC11 FOXK2 ALYREF LOC100130370 LRRC45 TSPAN10 ARHGDIA TBCD P4HB PDE6G LOC101929552 ZNF750 SNORD134 C17orf62 FASN MRPL12 SLC25A10 OXLD1 LOC101929511 TEPSIN PYCR1 MAFG DCXR MIR6787 HGS NPB FSCN2 CSNK1D OGFOD3 DUS1L SLC38A10 SECTM1 FN3KRP TMEM105 RAB40B MYADML2 FAAP100 CD7 RFNG GCGR AATK B3GNTL1 MAFG-AS1 CCDC137 CEP131 ASPSCR1 NOTUM SLC16A3 MIR4740
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	TEPSIN SLC38A10 AATK LOC105371925 C17orf89 CEP131 AATK-AS1
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	TEPSIN SLC38A10 LOC105371925 C17orf89 CEP131
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	SLC38A10 BAIAP2-AS1 TMEM105 C17orf89 AATK-AS1 MIR3065 TEPSIN LINC00482 AATK LOC105371925 MIR1250 CEP131 MIR338 BAIAP2 MIR657
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	TEPSIN SLC38A10 LINC00482 TMEM105 C17orf89
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	TEPSIN SLC38A10 LOC105371925 C17orf89 CEP131 AATK-AS1
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	ACTG1 MIR3186 SLC38A10 NPLOC4 TMEM105 C17orf89 FAAP100 AATK-AS1 TEPSIN LINC00482 LOC100130370 AATK LOC105371925 FSCN2 CEP131 BAHCC1 MIR4740
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	TEPSIN SLC38A10 LOC105371925 C17orf89

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity