Hs02147388_cn

• Gene Symbol: CEBPB
• Assay Reference Genome Location: Chr.20:50191093 on build GRCh38
• Cytoband: 20q13.13

Target Gene Details

• Entrez Gene ID: 1051
• Gene Name: CCAAT/enhancer binding protein beta
• Gene Aliases: C/EBP-beta, IL6DBP, NF-IL6, TCF5
• Location: Chr.20:50190583-50192690 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CEBPB	NM_001285878.1	1	511	NP_001272807.1
	NM_001285879.1	1	511	NP_001272808.1
	NM_005194.3	1	511	NP_005185.2
	AF289608.1	1	252	AAL55792.1
	AK291536.1	1	264
	BC007538.1	1	240	AAH07538.1
	BC021931.1	1	255	AAH21931.1
	KJ161450.1
	KJ161451.1
	KJ161452.1
	KJ161453.1
	KJ161454.1
	KJ161455.1
	KJ161456.1
	KJ161457.1
	KJ161458.1
	KJ161459.1
	KJ161460.1
	KJ161461.1
	KJ161462.1
	KJ161463.1
	KJ161464.1
	KJ161465.1
	KJ161466.1
	KJ161467.1
	KJ161468.1
	KJ161469.1
	KJ161470.1
	KJ161471.1
	KJ161472.1
	KJ161473.1
	KJ161474.1
	KJ161475.1
	KJ161476.1
	KJ161477.1
	KJ161478.1
	KJ161479.1
	KJ161480.1
	KJ161481.1

Target Gene Details

• Entrez Gene ID: 101927559
• Gene Name: CEBPB antisense RNA 1
• Gene Aliases: -
• Location: Chr.20:50184603-50192069 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CEBPB-AS1	NR_125739.1
	BX463443.2
	DA253693.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv702n67	Chr.20:50190063 - 50192790 on Build GRCh38	Gain	CEBPB-AS1 CEBPB
nsv828736	Chr.20:50189040 - 50193150 on Build GRCh38	Gain	CEBPB-AS1 CEBPB
nsv1061982	Chr.20:50111064 - 50483508 on Build GRCh38	Loss	TMEM189 LINC01271 LINC01273 CEBPB-AS1 LINC01272 LINC01270 UBE2V1 TMEM189-UBE2V1 CEBPB
esv34129	Chr.20:50132910 - 50304579 on Build GRCh38	Loss	TMEM189 LINC01273 CEBPB-AS1 LINC01272 LINC01270 TMEM189-UBE2V1 CEBPB

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

basic leucine zipper transcription factor

Gene Ontology Categories:

Process(es)

ovarian follicle development
embryonic placenta development
granuloma formation
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
acute-phase response
inflammatory response
immune response
memory
neuron differentiation
positive regulation of interleukin-4 production
mammary gland epithelial cell proliferation
response to endoplasmic reticulum stress
T-helper 1 cell activation
negative regulation of T cell proliferation
defense response to bacterium
negative regulation of neuron apoptotic process
regulation of interleukin-6 biosynthetic process
positive regulation of fat cell differentiation
positive regulation of osteoblast differentiation
regulation of osteoclast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
brown fat cell differentiation
mammary gland epithelial cell differentiation
regulation of transcription involved in cell fate commitment
intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
cellular response to lipopolysaccharide
cellular response to amino acid stimulus
cellular response to interleukin-1
cellular response to organic cyclic compound
hepatocyte proliferation
liver regeneration
positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
transcription factor binding
kinase binding
histone acetyltransferase binding
glucocorticoid receptor binding
protein homodimerization activity
histone deacetylase binding
ubiquitin-like protein ligase binding
protein heterodimerization activity