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Gene Symbol
B3GNTL1
Assay Reference Genome
Location

Chr.17:82943081 on build GRCh38
Cytoband
17q25.3
Assay ID Hs02156742_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 146712

Gene Name:

 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1

Gene Aliases:

 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1

Location:

 Chr.17:82942149-83051845 on Build GRCh38

Assay Gene Location:

 Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B3GNTL1 NM_001009905.2 13 2093 NP_001009905.1
NM_001320742.1 14 2211 NP_001307671.1
NM_001320743.1 9 2688 NP_001307672.1
NR_135465.1 14 2448
NR_135466.1
AK054757.1

Target Gene Details

Entrez Gene ID:

 6904

Gene Name:

 tubulin folding cofactor D

Gene Aliases:

 SSD-1, tfcD

Location:

 Chr.17:82752048-82943186 on Build GRCh38

Assay Gene Location:

 Within Exon 56
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TBCD NM_005993.4 39 4327 NP_005984.3
XM_005256399.4 27 3124 XP_005256456.1
XM_005256404.4 27 3166 XP_005256461.1
XM_006722290.2 38 4224 XP_006722353.1
XM_006722291.3 27 3448 XP_006722354.1
XM_006722292.2 25 2860 XP_006722355.1
XM_011523589.1 34 3867 XP_011521891.1
XM_011523590.1 34 3948 XP_011521892.1
XM_011523591.1 34 3852 XP_011521893.1
XM_011523593.1 33 3459 XP_011521895.1
XM_011523594.1 26 2929 XP_011521896.1
XM_011523595.2 26 3007 XP_011521897.1
XM_011523597.2 24 3660 XP_011521899.1
XM_011523598.1 24 2718 XP_011521900.1
XM_011523599.2 24 3436 XP_011521901.1
XM_011523600.2 25 2880 XP_011521902.1
XM_017024989.1 23 2574 XP_016880478.1
XM_017024990.1 27 2946 XP_016880479.1
AK057975.1 20 2205
BC012824.2 12 1784 AAH12824.2
BG254219.1 1 294

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1067553 Chr.17:82530808 - 83091923 on Build GRCh38 Loss LOC101929552 LOC105371944 FN3K ZNF750 B3GNTL1 TBCD LOC105376791 RAB40B METRNL MIR4525 FN3KRP WDR45B FOXK2
dgv3296n100 Chr.17:82851564 - 83091923 on Build GRCh38 Gain B3GNTL1 TBCD METRNL LOC105371944
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain PDE6G MIR6786 TEX19 NPLOC4 MAFG-AS1 MIR3186 C17orf89 SLC38A10 MIR6787 TEPSIN MYADML2 SECTM1 LOC105376791 UTS2R CSNK1D LOC101929511 MRPL12 AATK MAFG MIR4525 DCXR AATK-AS1 STRA13 GCGR CEP131 ACTG1 RFNG PCYT2 FN3K ARHGDIA RAC3 PYCR1 LOC105371925 SIRT7 FSCN2 NPB ANAPC11 FN3KRP OXLD1 OGFOD3 LOC101929552 NOTUM ARL16 HGS TSPAN10 TMEM105 HEXDC MCRIP1 MIR4740 CCDC57 RAB40B CD7 FOXK2 ALYREF SLC25A10 SNORD134 GPS1 FASN P4HB SLC16A3 PPP1R27 FAAP100 BAHCC1 LOC105371944 LRRC45 ZNF750 NARF LOC105376790 DUS1L B3GNTL1 TBCD ASPSCR1 LINC00482 C17orf62 LOC100130370 CCDC137 WDR45B
nsv576217 Chr.17:82937869 - 82960820 on Build GRCh38 Loss B3GNTL1 TBCD LOC105371944
dgv3297n100 Chr.17:82879855 - 83048753 on Build GRCh38 Gain B3GNTL1 TBCD LOC105371944
esv3893052 Chr.17:82895301 - 83102003 on Build GRCh38 Gain B3GNTL1 TBCD METRNL LOC105371944
nsv1057153 Chr.17:82876571 - 83091923 on Build GRCh38 Loss B3GNTL1 TBCD METRNL LOC105371944
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss TEX19 MAFG-AS1 MIR6787 MYADML2 SECTM1 LOC105376791 UTS2R CSNK1D LOC101929511 MAFG MIR4525 DCXR STRA13 RFNG PCYT2 FN3K ARHGDIA RAC3 PYCR1 SIRT7 METRNL NPB ANAPC11 FN3KRP OGFOD3 LOC101929552 NOTUM HEXDC MCRIP1 CCDC57 RAB40B CD7 FOXK2 ALYREF SNORD134 GPS1 FASN P4HB SLC16A3 PPP1R27 LOC105371944 LRRC45 ZNF750 NARF LOC105376790 DUS1L B3GNTL1 TBCD ASPSCR1 C17orf62 WDR45B

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