Hs02161003_cn

• Gene Symbol: CANT1
• Assay Reference Genome Location: Chr.17:78997631 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124583
• Gene Name: calcium activated nucleotidase 1
• Gene Aliases: DBQD, DBQD1, SCAN-1, SCAN1, SHAPY
• Location: Chr.17:78991716-79009817 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CANT1	NM_001159772.1			NP_001153244.1
	NM_001159773.1			NP_001153245.1
	NM_138793.3	2	487	NP_620148.1
	XM_005257021.1	3	555	XP_005257078.1
	XM_005257022.1			XP_005257079.1
	XM_006721683.1			XP_006721746.1
	XM_011524291.1	5	883	XP_011522593.1
	XM_011524293.1	4	773	XP_011522595.1
	XM_011524294.1			XP_011522596.1
	XM_011524295.2			XP_011522597.1
	AB097006.1			BAC77359.1
	AB097033.1			BAC77386.1
	AF328554.2			AAM94564.1
	AK074687.1	2	426	BAC11139.1
	AK295930.1
	BC017655.1			AAH17655.1
	BC065038.1			AAH65038.1
	DC355691.1	2	487

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv952378	Chr.17:78989919 - 79007518 on Build GRCh38	Deletion	CANT1
nsv470610	Chr.17:78973800 - 79091723 on Build GRCh38	Loss	LGALS3BP CANT1 ENGASE RBFOX3 C1QTNF1-AS1 C1QTNF1
nsv523650	Chr.17:78933797 - 79165563 on Build GRCh38	Loss	LGALS3BP CANT1 ENGASE RBFOX3 C1QTNF1-AS1 C1QTNF1
nsv1057193	Chr.17:78921031 - 79481744 on Build GRCh38	Gain	LGALS3BP CANT1 ENGASE RBFOX3 C1QTNF1-AS1 TIMP2 C1QTNF1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

nucleotide phosphatase

Gene Ontology Categories:

Process(es)

signal transduction
proteoglycan biosynthetic process
positive regulation of I-kappaB kinase/NF-kappaB signaling

Function(s)

guanosine-diphosphatase activity
signal transducer activity
calcium ion binding
uridine-diphosphatase activity