Hs02179043_cn

• Gene Symbol: CETN1
• Assay Reference Genome Location: Chr.18:581364 on build GRCh38
• Cytoband: 18p11.32

Target Gene Details

• Entrez Gene ID: 1068
• Gene Name: centrin 1
• Gene Aliases: CEN1, CETN
• Location: Chr.18:580343-582020 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CETN1	NM_004066.2	1	1022	NP_004057.1
	BC029515.1	1	1008	AAH29515.1
	U03270.1	1	998	AAC27343.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv576236	Chr.18:319176 - 794272 on Build GRCh38	Gain	LOC105376854 COLEC12 YES1 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
nsv576239	Chr.18:394946 - 712037 on Build GRCh38	Gain	LOC105376854 COLEC12 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
dgv5810n54	Chr.18:351004 - 2238246 on Build GRCh38	Gain	LOC105376854 COLEC12 YES1 CETN1 ENOSF1 LOC388456 LINC00470 CLUL1 TYMSOS ADCYAP1 TYMS
nsv576242	Chr.18:567127 - 841320 on Build GRCh38	Gain	YES1 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
esv3641497	Chr.18:551569 - 745897 on Build GRCh38	Gain	YES1 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
nsv528169	Chr.18:551688 - 2240220 on Build GRCh38	Loss	YES1 CETN1 ENOSF1 LOC388456 LINC00470 CLUL1 TYMSOS ADCYAP1 TYMS
dgv3307n100	Chr.18:469797 - 683607 on Build GRCh38	Gain	LOC105376854 COLEC12 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
nsv1060188	Chr.18:575087 - 863351 on Build GRCh38	Gain	YES1 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
nsv833577	Chr.18:521331 - 725019 on Build GRCh38	Gain+Loss	YES1 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
esv3893055	Chr.18:415105 - 743226 on Build GRCh38	Gain	LOC105376854 COLEC12 YES1 CETN1 ENOSF1 CLUL1 TYMSOS TYMS
nsv482935	Chr.18:10001 - 2900002 on Build GRCh38	Loss	COLEC12 YES1 CETN1 NDC80 USP14 EMILIN2 LOC388456 LINC00470 CLUL1 TYMSOS ADCYAP1 ROCK1P1 CBX3P2 TYMS LOC101926997 LOC105376854 METTL4 ENOSF1 SMCHD1 MIR8078 THOC1
nsv576228	Chr.18:69836 - 1506323 on Build GRCh38	Loss	COLEC12 YES1 CETN1 USP14 LOC388456 LINC00470 CLUL1 TYMSOS ADCYAP1 ROCK1P1 TYMS LOC105376854 ENOSF1 MIR8078 THOC1

More Information

Additional Information:

For this assay, SNP(s) [rs111457289,rs113711943] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Process(es)

mitotic nuclear division
cellular response to heat
cell division

Function(s)

calcium ion binding
protein binding
microtubule binding
G-protein beta/gamma-subunit complex binding
heterotrimeric G-protein binding