Hs02196277_cn

• Gene Symbol: FARP1
• Assay Reference Genome Location: Chr.13:98176854 on build GRCh38
• Cytoband: 13q32.2

Target Gene Details

• Entrez Gene ID: 10160
• Gene Name: FERM, ARH/RhoGEF and pleckstrin domain protein 1
• Gene Aliases: CDEP, FARP1-IT1, PLEKHC2, PPP1R75
• Location: Chr.13:98142562-98449773 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FARP1	NM_001001715.3			NP_001001715.2
	NM_001286839.1			NP_001273768.1
	NM_005766.3			NP_005757.1
	XM_011521046.2			XP_011519348.1
	XM_017020312.1			XP_016875801.1
	AB008430.1			BAA24267.1
	AI273567.1
	BC041595.1			AAH41595.1
	BC071592.1			AAH71592.1
	BM763139.1
	CF994038.1
	DB498534.1

Target Gene Details

• Entrez Gene ID: 140432
• Gene Name: ring finger protein 113B
• Gene Aliases: RNF161, ZNF183L1, bA10G5.1
• Location: Chr.13:98175785-98177267 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RNF113B	NM_178861.4	1	414	NP_849192.1
	AF539427.1	1	395	AAN33063.1
	BC017585.2	1	414	AAH17585.1
	BC025388.1	1	407	AAH25388.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1045047	Chr.13:98175009 - 98306412 on Build GRCh38	Gain	MIR3170 RNF113B FARP1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

synapse assembly
negative regulation of phosphatase activity
regulation of Rho protein signal transduction
positive regulation of GTPase activity
dendrite morphogenesis
snoRNA splicing
mRNA cis splicing, via spliceosome

Function(s)

Rho guanyl-nucleotide exchange factor activity
cytoskeletal protein binding
Rac guanyl-nucleotide exchange factor activity
zinc ion binding