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See other CNOT3 CNV Assays ›
Gene Symbol
CNOT3
Assay Reference Genome
Location

Chr.19:54148176 on build GRCh38
Cytoband
19q13.42
Assay ID Hs02198623_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4849

Gene Name:

 CCR4-NOT transcription complex subunit 3

Gene Aliases:

 LENG2, NOT3, NOT3H

Location:

 Chr.19:54137689-54155708 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CNOT3 NM_014516.3 NP_055331.1
XM_005278279.1 XP_005278336.1
XM_005278280.2 XP_005278337.1
XM_005278281.1 XP_005278338.1
XM_005278282.2 XP_005278339.1
XM_011526992.1 XP_011525294.1
XM_011526993.2 XP_011525295.1
AB014591.1
AF180474.1 AAF29828.1
AK160386.1 BAD18729.1
AK300434.1
AL133647.1 CAB63766.1
BC016474.1 AAH16474.1
BM781759.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3644782 Chr.19:54138064 - 54154026 on Build GRCh38 Gain CNOT3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss MBOAT7 TFPT CNOT3 TMC4 LENG1 NDUFA3 PRPF31
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion MBOAT7 TFPT CNOT3 TMC4 OSCAR LENG1 NDUFA3 TSEN34 PRPF31
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion CACNG8 MIR518C MIR518D ZNF765 NDUFA3 LILRB5 MIR526B MIR520E BIRC8 CACNG7 MIR524 VSTM1 MIR520C MIR517C MIR519D MIR516A1 CNOT3 DPRX ZNF331 MIR521-1 MIR520F MIR523 LILRB3 MIR518A1 MIR526A2 VN1R2 OSCAR RPS9 MIR512-2 MIR519E TARM1 MIR516B2 MIR520D TMC4 NLRP12 LILRA6 ZNF525 ZNF761 MIR498 MIR371A MIR515-2 MIR518A2 MIR373 LILRB2 ZNF677 MIR1283-2 ZNF845 ZNF813 MIR1323 MIR935 MIR516A2 MYADM MIR520B TPM3P9 MIR519B LILRA5 ZNF665 TFPT MIR4752 MIR372 LENG1 LOC284379 TSEN34 MIR1283-1 FAM90A27P MIR520H ZNF818P LOC105372457 MIR519C MIR522 MIR518E MIR521-2 CACNG6 MIR526A1 MIR512-1 MIR518F MIR525 VN1R4 PRPF31 MIR517A MIR520A MIR519A2 MIR516B1 MIR517B MIR518B MIR515-1 MIR527 MBOAT7 MIR520G MIR519A1 PRKCG MIR371B

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