Hs02204686_cn

• Gene Symbol: GLIS1
• Assay Reference Genome Location: Chr.1:53514768 on build GRCh38
• Cytoband: 1p32.3

Target Gene Details

• Entrez Gene ID: 148979
• Gene Name: GLIS family zinc finger 1
• Gene Aliases: -
• Location: Chr.1:53506233-53739171 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GLIS1	NM_147193.2			NP_671726.2
	XM_017000408.1			XP_016855897.1
	XM_017000409.1			XP_016855898.1
	XM_017000410.1			XP_016855899.1
	XM_017000411.1			XP_016855900.1
	AK090634.1			BAC03494.1
	AK093474.1			BAC04178.1
	BC101799.1
	BC104911.1			AAI04912.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522165	Chr.1:53506376 - 53539387 on Build GRCh38	Loss	GLIS1
nsv428443	Chr.1:53452879 - 53563563 on Build GRCh38	Gain	GLIS1 DMRTB1
nsv509269	Chr.1:53296636 - 53583096 on Build GRCh38	Insertion	SLC25A3P1 LOC105378732 GLIS1 LRP8 DMRTB1
nsv829882	Chr.1:53449992 - 53629940 on Build GRCh38	Loss	GLIS1 DMRTB1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
metal ion binding