Name: [Hs02228389_cn] [SLC4A11]
Creator: Thermo Fisher Scientific
Keywords: [SLC4A11] Assay, [solute carrier family 4 member 11] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	83959
Gene Name:	solute carrier family 4 member 11
Gene Aliases:	BTR1, CDPD1, CHED, CHED2, NABC1, dJ794I6.2
Location:	Chr.20:3227417-3241483 on Build GRCh38
Assay Gene Location:	Within Exon 24

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC4A11	NM_001174089.1	20	2712	NP_001167560.1
	NM_001174090.1	20	2862	NP_001167561.1
	NM_032034.3	19	2704	NP_114423.1
	NR_135000.1	20	2706
	XM_005260856.4	19	3086	XP_005260913.1
	XM_005260857.1	20	2731	XP_005260914.1
	XM_011529383.2	20	4307	XP_011527685.1
	XM_011529384.1	20	2949	XP_011527686.1
	XM_011529385.1	20	2776	XP_011527687.1
	XM_017028093.1	20	3080	XP_016883582.1
	XM_017028094.1	20	2584	XP_016883583.1
	XM_017028095.1	19	2941	XP_016883584.1
	XM_017028096.1	21	2961	XP_016883585.1
	AF336127.1	19	2704	AAK16734.1
	AK075303.1	14	1979	BAC11536.1
	AK091157.1	20	2706
	AK296508.1	20	2862
	AK296760.1	20	2661
	BC110540.1	19	2677	AAI10541.1
	BC110541.1	18	2761	AAI10542.1
	BM666654.1	1	403
	HY211104.1	1	388

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067207	Chr.20:3191285 - 3404426 on Build GRCh38	Gain	DDRGK1 C20orf194 ITPA SLC4A11
nsv585276	Chr.20:3030542 - 3366307 on Build GRCh38	Gain	OXT DDRGK1 FASTKD5 PTPRA LZTS3 ITPA UBOX5 GNRH2 AVP SLC4A11 MRPS26 UBOX5-AS1 C20orf194
nsv952979	Chr.20:3219555 - 3244454 on Build GRCh38	Deletion	ITPA SLC4A11
nsv528355	Chr.20:3190691 - 3242579 on Build GRCh38	Loss	DDRGK1 ITPA SLC4A11
nsv833898	Chr.20:3147423 - 3309891 on Build GRCh38	Gain+Loss	UBOX5-AS1 DDRGK1 FASTKD5 C20orf194 LZTS3 ITPA UBOX5 SLC4A11