Hs02231907_cn

• Gene Symbol: GHRLOS
• Assay Reference Genome Location: Chr.3:10280946 on build GRCh38
• Cytoband: 3p25.3

Target Gene Details

• Entrez Gene ID: 100126793
• Gene Name: ghrelin opposite strand/antisense RNA
• Gene Aliases: GHRL-AS1, GHRLAS, NCRNA00068
• Location: Chr.3:10280952-10293449 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GHRLOS	NR_004431.3
	NR_024144.2
	NR_024145.2
	NR_073566.1
	NR_073567.1
	NR_073568.1
	EU789528.1
	EU789529.1
	EU789530.1
	EU789534.1
	EU789535.1
	EU789536.1
	EU789537.1
	EU789538.1
	EU789539.1
	EU789540.1
	EU789541.1
	EU789542.1
	EU789543.1
	EU789544.1
	EU789545.1
	EU789546.1
	EU789547.1
	EU789548.1	1	1545
	EU789549.1
	EU789550.1
	EU789551.1
	EU789552.1

Target Gene Details

• Entrez Gene ID: 9797
• Gene Name: TatD DNase domain containing 2
• Gene Aliases: -
• Location: Chr.3:10248493-10281222 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TATDN2	NM_014760.3	8	4631	NP_055575.3
	AW274827.1
	BC090935.1	8	4212	AAH90935.1
	D86972.1	9	4419

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv436362	Chr.3:10048344 - 11860564 on Build GRCh38	Deletion	LINC00606 LINC00852 SLC6A11 FANCD2OS GHRL HRH1 ATP2B2-IT2 SLC6A1-AS1 LOC101927467 GHRLOS SEC13 MIR378B BRK1 VGLL4 MIR885 TAMM41 SLC6A1 FANCD2 ATP2B2 TATDN2 VHL ATG7 IRAK2
nsv508903	Chr.3:10275353 - 10401894 on Build GRCh38	Insertion	MIR378B MIR885 LINC00852 GHRL ATP2B2 TATDN2 GHRLOS SEC13
nsv589650	Chr.3:10260488 - 10294102 on Build GRCh38	Loss	LINC00852 GHRL TATDN2 GHRLOS
dgv762e201	Chr.3:10008967 - 11913136 on Build GRCh38	Deletion	LINC00852 SLC6A11 GHRL ATP2B2-IT2 SLC6A1-AS1 LOC401052 LOC101927467 SEC13 MIR378B VGLL4 MIR885 TAMM41 CIDECP SLC6A1 TATDN2 VHL ATG7 LINC00606 FANCD2OS HRH1 FANCD2P2 GHRLOS EMC3 BRK1 FANCD2 ATP2B2 IRAK2
nsv1121603	Chr.3:10071433 - 11889279 on Build GRCh38	Deletion	LINC00606 LINC00852 SLC6A11 FANCD2OS GHRL HRH1 ATP2B2-IT2 FANCD2P2 SLC6A1-AS1 LOC101927467 GHRLOS SEC13 MIR378B BRK1 VGLL4 MIR885 TAMM41 SLC6A1 FANCD2 ATP2B2 TATDN2 VHL ATG7 IRAK2
nsv436869	Chr.3:10064456 - 11877985 on Build GRCh38	Insertion	LINC00606 LINC00852 SLC6A11 FANCD2OS GHRL HRH1 ATP2B2-IT2 FANCD2P2 SLC6A1-AS1 LOC101927467 GHRLOS SEC13 MIR378B BRK1 VGLL4 MIR885 TAMM41 SLC6A1 FANCD2 ATP2B2 TATDN2 VHL ATG7 IRAK2
nsv1073204	Chr.3:9996548 - 11875005 on Build GRCh38	Deletion	LINC00852 SLC6A11 GHRL ATP2B2-IT2 SLC6A1-AS1 LOC401052 LOC101927467 SEC13 MIR378B VGLL4 MIR885 TAMM41 CIDECP EMC3-AS1 SLC6A1 TATDN2 VHL ATG7 LINC00606 FANCD2OS HRH1 FANCD2P2 GHRLOS EMC3 BRK1 FANCD2 ATP2B2 IRAK2

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

DNA catabolic process
IRE1-mediated unfolded protein response
nucleic acid phosphodiester bond hydrolysis

Function(s)

deoxyribonuclease activity
endodeoxyribonuclease activity, producing 5'-phosphomonoesters
metal ion binding