Hs02280394_cn

• Gene Symbol: TMC4
• Assay Reference Genome Location: Chr.19:54163050 on build GRCh38
• Cytoband: 19q13.42

Target Gene Details

• Entrez Gene ID: 147798
• Gene Name: transmembrane channel like 4
• Gene Aliases: -
• Location: Chr.19:54160095-54173250 on Build GRCh38
• Assay Gene Location: Overlaps Intron 9 - Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMC4	NM_001145303.2			NP_001138775.2
	NM_144686.3			NP_653287.2
	XM_011526486.2			XP_011524788.1
	AK124406.1
	AK314973.1
	AY236492.1			AAP69870.1
	AY263166.1			AAP78781.1
	BC025323.1			AAH25323.1
	BC032477.1			AAH32477.1
	BQ082417.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9751	Chr.19:54158885 - 54193528 on Build GRCh38	Gain	TSEN34 LENG1 MBOAT7 TMC4
nsv515623	Chr.19:54102901 - 54179150 on Build GRCh38	Loss	NDUFA3 LENG1 MBOAT7 TFPT PRPF31 TMC4 CNOT3
nsv953613	Chr.19:54097214 - 54198733 on Build GRCh38	Deletion	TSEN34 NDUFA3 LENG1 MBOAT7 TFPT OSCAR PRPF31 TMC4 CNOT3
esv2718812	Chr.19:53184636 - 54322450 on Build GRCh38	Deletion	MIR1283-1 MIR520A MIR523 MIR520E TPM3P9 ZNF677 MIR517B ZNF845 MIR1323 MIR516A1 NLRP12 MIR371A MIR371B ZNF761 NDUFA3 MIR520G MIR512-1 LILRB3 MIR526A2 MIR526A1 MIR518B MIR498 MIR519A1 MIR521-1 MIR517C LILRA6 MIR516B1 MIR518C MIR518A1 MIR519C VSTM1 LOC105372457 MIR526B MIR518A2 MIR517A VN1R2 CACNG7 FAM90A27P MIR524 BIRC8 ZNF765 LOC284379 MIR520D MIR525 TSEN34 LILRB5 MBOAT7 CACNG8 TFPT MIR521-2 OSCAR DPRX ZNF813 MIR4752 MIR519A2 MIR518D MIR519E TARM1 MIR520H MIR512-2 PRKCG ZNF331 LILRB2 MIR515-2 MIR520F MIR518F ZNF665 MIR515-1 RPS9 MIR935 TMC4 MIR520C MIR527 LENG1 MIR518E ZNF818P MIR520B MIR516B2 MIR372 MIR519B MIR519D ZNF525 VN1R4 PRPF31 MYADM MIR1283-2 CACNG6 MIR373 MIR516A2 LILRA5 MIR522 CNOT3
nsv510774	Chr.19:54158011 - 54269511 on Build GRCh38	Deletion	TSEN34 LENG1 LILRB3 LILRB5 MBOAT7 RPS9 LILRA6 TMC4

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

ion transport