Genomic Map
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Target Gene Details
Entrez Gene ID: | 57491 |
Gene Name: | aryl-hydrocarbon receptor repressor |
Gene Aliases: |
AHH, AHHR, bHLHe77 |
Location: |
Chr.5:304176-438291 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| AHRR | NM_001242412.1 | NP_001229341.1 | ||
| NM_020731.4 | NP_065782.2 | |||
| AB033060.1 | ||||
| BC151852.1 | ||||
| BC152406.1 | ||||
| EU293605.1 |
Target Gene Details
Entrez Gene ID: | 10016 |
Gene Name: | programmed cell death 6 |
Gene Aliases: |
ALG-2, ALG2, PEF1B |
Location: |
Chr.5:271621-314974 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PDCD6 | NM_001267556.1 | 4 | 360 | NP_001254485.1 |
| NM_001267557.1 | NP_001254486.1 | |||
| NM_001267558.1 | 5 | 275 | NP_001254487.1 | |
| NM_001267559.1 | NP_001254488.1 | |||
| NM_013232.3 | 4 | 360 | NP_037364.1 | |
| AF035606.1 | 4 | 386 | AAC27697.1 | |
| AK001917.1 | 4 | 311 | ||
| AK223366.1 | 4 | 360 | BAD97086.1 | |
| AK308872.1 | 3 | 258 | ||
| AK315370.1 | 4 | 360 | ||
| BC012384.1 | 4 | 328 | AAH12384.1 | |
| BC106706.2 | 4 | 309 | AAI06707.1 | |
| BC110291.1 | 4 | 324 | AAI10292.1 | |
| BG390506.1 | ||||
| BI553617.1 | 4 | 362 | ||
| BT020072.1 | 4 | 260 | AAV38875.1 | |
| CR983268.1 | ||||
| DB495449.1 | 5 | 260 | ||
| U58773.1 | 4 | 291 | AAF14336.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2759315 | Chr.5:17263 - 595840 on Build GRCh38 | Loss |
 AHRR
SDHA
HRAT5
EXOC3
MIR4456
EXOC3-AS1
PP7080
SLC9A3
LOC100288152
PLEKHG4B
CCDC127
LRRC14B
PDCD6
|
| esv3894107 | Chr.5:81322 - 801057 on Build GRCh38 | Gain |
AHRR
SDHA
LOC100996325
ZDHHC11B
CEP72
HRAT5
EXOC3
MIR4456
EXOC3-AS1
TPPP
ZDHHC11
PP7080
SLC9A3
LOC100288152
PLEKHG4B
LOC101929895
CCDC127
LRRC14B
PDCD6
|
| nsv428458 | Chr.5:93781 - 338972 on Build GRCh38 | Loss |
AHRR
SDHA
PLEKHG4B
HRAT5
CCDC127
LRRC14B
PDCD6
|
| esv2752083 | Chr.5:28951 - 346521 on Build GRCh38 | Gain |
AHRR
SDHA
PLEKHG4B
HRAT5
CCDC127
LRRC14B
PDCD6
|
| esv3603741 | Chr.5:301153 - 312236 on Build GRCh38 | Gain |
AHRR
PDCD6
|
| nsv1030767 | Chr.5:154674 - 457840 on Build GRCh38 | Gain |
AHRR
SDHA
PLEKHG4B
HRAT5
EXOC3
CCDC127
LRRC14B
EXOC3-AS1
PDCD6
|
| nsv461887 | Chr.5:299506 - 438449 on Build GRCh38 | Gain |
AHRR
PDCD6
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Molecular Function -
basic helix-loop-helix transcription factor
actin or actin-binding cytoskeletal protein
Gene Ontology Categories:
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