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Gene Symbol
NARFL
Assay Reference Genome
Location

Chr.16:730001 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02356352_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 64428

Gene Name:

 nuclear prelamin A recognition factor like

Gene Aliases:

 HPRN, IOP1, LET1L, NAR1, PRN

Location:

 Chr.16:729753-741038 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NARFL NM_001304799.1 12 1982 NP_001291728.1
NM_022493.2 11 1900 NP_071938.1
AK025641.1 11 1859 BAB15199.1
AK025861.1 9 1599 BAB15261.1
AK056467.1 10 2977
AK094812.1 3 2584
AK095675.1 9 2245
AK126151.1 2 2714
AY129231.1 11 1853 AAM98737.1
BC030248.1 11 1852 AAH30248.1
BU741568.1 1 263

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss WDR90 METTL26 RHBDL1 STUB1 WDR24 LOC105371184 LOC100287175 RHOT2 WFIKKN1 HAGHL FAM173A RAB40C JMJD8 FBXL16 CCDC78 METRN LOC105371038 MCRIP2 NARFL
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain WDR90 METTL26 RHBDL1 STUB1 WDR24 LOC105371184 LOC100287175 RHOT2 WFIKKN1 HAGHL FAM173A JMJD8 FBXL16 CCDC78 METRN LOC105371038 MCRIP2 NARFL
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication C1QTNF8 SLC9A3R2 NTN3 RPL23AP5 LMF1 RHBDL1 MIR6859-4 DDX11L10 LOC652276 WDR24 PDIA2 RAB26 TSR3 LOC105371049 LOC107987233 NHLRC4 MSRB1 MIR3677 GFER FAM234A MIR5587 RNF151 MSLN WDR90 NTHL1 LOC105371046 NPRL3 UNKL AXIN1 TPSD1 MIR4516 ZNF598 TMEM8A HAGHL FAM173A JMJD8 PRR35 HBA2 LOC105371047 RPL3L E4F1 CHTF18 NME4 LOC105371038 CASKIN1 NOXO1 SNRNP25 MRPS34 AMDHD2 NPW CAPN15 CACNA1H LOC105371184 PRR25 FBXL16 MPG POLR3K ECI1 SNHG9 MIR3177 SOX8 METTL26 RHBDF1 DECR2 STUB1 SSTR5 GNPTG HBQ1 TBL3 LOC107984876 LMF1-AS1 IFT140 ABCA3 CLCN7 RAB11FIP3 UBE2I MRPL28 SNHG19 LOC729652 FLJ42627 SNORA64 HBA1 LOC100287175 RHOT2 SYNGR3 WFIKKN1 ABCA17P RAB40C LOC106660606 PRSS29P CEMP1 CCDC78 MLST8 RPUSD1 KCTD5 CCDC154 SPSB3 LINC00235 FAHD1 LOC101929280 RGS11 NARFL CRAMP1 PDPK1 MAPK8IP3 MIR6768 HAGH SNORD60 ATP6V0C EME2 PIGQ CCNF TMEM204 TRAF7 MIR1225 HS3ST6 SNORA10 BAIAP3 NDUFB10 HBZ MIR6767 PRSS27 BRICD5 MEIOB RPS2 SNORA78 LUC7L RNPS1 IGFALS TPSG1 TPSB2 GNG13 HBM WASIR2 MIR4717 LOC100134368 MIR3180-5 SSTR5-AS1 TSC2 METRN C16orf91 PGP PKD1 TBC1D24 MCRIP2 DNASE1L2 MIR940 MIR662 NME3 MIR6511B1 MIR3178 LOC105371045 MIR3176 NUBP2 PTX4 ARHGDIG HN1L ERVK13-1 LINC00254 C16orf59 TPSAB1 TELO2
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss MSLN WDR90 RHBDL1 STUB1 WDR24 LOC105371184 RHOT2 HAGHL FAM173A JMJD8 FBXL16 CCDC78 METRN NARFL
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss MSLN WDR90 MIR662 RHBDL1 STUB1 WDR24 LOC105371184 GNG13 LOC100287175 RHOT2 HAGHL FAM173A JMJD8 FBXL16 CCDC78 METRN RPUSD1 CHTF18 LOC105371038 MCRIP2 NARFL
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss RHBDL1 CAPN15 WDR24 LOC105371184 GNG13 LOC100287175 RHOT2 PRR25 WFIKKN1 RAB40C LOC107987233 FBXL16 NHLRC4 CCDC78 METRN RPUSD1 LINC00235 MCRIP2 LOC101929280 MIR5587 NARFL MSLN WDR90 METTL26 MIR662 STUB1 MIR3176 PIGQ HAGHL FAM173A JMJD8 PRR35 CHTF18 LOC105371038 RAB11FIP3
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss MSLN HAGHL FAM173A JMJD8 FBXL16 CCDC78 STUB1 METRN WDR24 NARFL
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss RHBDL1 CAPN15 WDR24 LOC105371184 GNG13 LOC100287175 RHOT2 PRR25 WFIKKN1 RAB40C LOC107987233 FBXL16 NHLRC4 CCDC78 METRN RPUSD1 LINC00235 MCRIP2 LOC101929280 MIR5587 NARFL MSLN WDR90 METTL26 MIR662 STUB1 MIR3176 PIGQ HAGHL FAM173A JMJD8 PRR35 CHTF18 LOC105371038 RAB11FIP3
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion C1QTNF8 LMF1 RHBDL1 CAPN15 WDR24 LOC105371184 GNG13 LOC100287175 RHOT2 PRR25 WFIKKN1 RAB40C LOC107987233 FBXL16 NHLRC4 SSTR5-AS1 CCDC78 METRN RPUSD1 LINC00235 MCRIP2 LOC101929280 MIR5587 NARFL SOX8 MSLN WDR90 METTL26 MIR662 STUB1 MIR3176 SSTR5 PIGQ LOC107984876 LMF1-AS1 HAGHL FAM173A JMJD8 PRR35 CHTF18 LOC105371038 RAB11FIP3
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss WDR90 METTL26 RHBDL1 STUB1 WDR24 PIGQ LOC105371184 LOC100287175 RHOT2 WFIKKN1 HAGHL FAM173A RAB40C JMJD8 FBXL16 CCDC78 METRN LOC105371038 MCRIP2 LOC101929280 NARFL
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RHBDL1 WDR24 LOC105371184 GNG13 LOC100287175 RHOT2 WFIKKN1 RAB40C FBXL16 CCDC78 METRN RPUSD1 MCRIP2 LOC101929280 NARFL MSLN WDR90 METTL26 MIR662 STUB1 PIGQ HAGHL FAM173A JMJD8 CHTF18 LOC105371038
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication RHBDL1 CAPN15 WDR24 LOC105371184 GNG13 LOC100287175 RHOT2 PRR25 WFIKKN1 RAB40C LOC107987233 FBXL16 NHLRC4 CCDC78 METRN RPUSD1 LINC00235 MCRIP2 LOC101929280 MIR5587 NARFL MSLN WDR90 METTL26 MIR662 STUB1 MIR3176 PIGQ HAGHL FAM173A JMJD8 PRR35 CHTF18 LOC105371038 RAB11FIP3

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More Information


Additional Information:

For this assay, SNP(s) [rs112746017] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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