Hs02381330_cn

• Gene Symbol: TRPT1
• Assay Reference Genome Location: Chr.11:64224640 on build GRCh38
• Cytoband: 11q13.1

Target Gene Details

• Entrez Gene ID: 83707
• Gene Name: tRNA phosphotransferase 1
• Gene Aliases: -
• Location: Chr.11:64223799-64226254 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRPT1	NM_001033678.3	5	619	NP_001028850.2
	NM_001160389.1	5	625	NP_001153861.1
	NM_001160390.1	5	607	NP_001153862.1
	NM_001160392.1	5	619	NP_001153864.1
	NM_001160393.1	4	414	NP_001153865.1
	NM_031472.3	4	535	NP_113660.1
	XM_005274345.4	5	539	XP_005274402.1
	XM_005274346.4	5	498	XP_005274403.1
	XM_005274347.4	4	415	XP_005274404.1
	XM_006718706.3	5	501	XP_006718769.1
	XM_006718707.3	5	448	XP_006718770.1
	XM_017018400.1	4	415	XP_016873889.1
	XM_017018401.1	4	490	XP_016873890.1
	AK026364.1	4	1128
	AY211494.1	5	575	AAO62941.1
	BC005133.2	4	431	AAH05133.1
	BG105545.1	5	551
	BM982538.1	4	406
	BQ672032.1	4	433
	BQ674339.1	4	357
	DR004975.1	5	523

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1159904	Chr.11:64150129 - 64279169 on Build GRCh38	Deletion	BAD NUDT22 DNAJC4 FERMT3 MACROD1 VEGFB STIP1 TRPT1 FKBP2 LOC105369340 PLCB3 PPP1R14B GPR137
nsv951010	Chr.11:63942829 - 64352128 on Build GRCh38	Deletion	TRMT112 COX8A NUDT22 NAA40 DNAJC4 FERMT3 PRDX5 FLRT1 CCDC88B BAD TEX40 OTUB1 MIR7155 KCNK4 MACROD1 VEGFB STIP1 ESRRA KCNK4-TEX40 TRPT1 FKBP2 LOC105369340 PLCB3 PPP1R14B GPR137
dgv1963n54	Chr.11:64174262 - 64329761 on Build GRCh38	Loss	TRMT112 BAD NUDT22 TEX40 DNAJC4 FERMT3 KCNK4 PRDX5 VEGFB STIP1 ESRRA KCNK4-TEX40 TRPT1 FKBP2 LOC105369340 PLCB3 PPP1R14B GPR137
nsv555187	Chr.11:64185649 - 64260416 on Build GRCh38	Loss	VEGFB NUDT22 STIP1 TRPT1 FKBP2 LOC105369340 PLCB3 DNAJC4 PPP1R14B FERMT3
nsv832186	Chr.11:64204788 - 64402587 on Build GRCh38	Loss	MIR1237 TRMT112 BAD NUDT22 TEX40 MIR7155 DNAJC4 FERMT3 KCNK4 PRDX5 VEGFB ESRRA KCNK4-TEX40 TRPT1 FKBP2 LOC105369340 CCDC88B PLCB3 PPP1R14B RPS6KA4 GPR137
nsv555184	Chr.11:64156974 - 64275525 on Build GRCh38	Loss	BAD NUDT22 DNAJC4 FERMT3 MACROD1 VEGFB STIP1 TRPT1 FKBP2 LOC105369340 PLCB3 PPP1R14B GPR137
nsv469961	Chr.11:64055468 - 64318495 on Build GRCh38	Loss	TRMT112 BAD NUDT22 TEX40 DNAJC4 FERMT3 KCNK4 MACROD1 PRDX5 VEGFB STIP1 FLRT1 ESRRA KCNK4-TEX40 TRPT1 FKBP2 LOC105369340 PLCB3 PPP1R14B GPR137

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

tRNA splicing, via endonucleolytic cleavage and ligation
regulation of protein kinase activity

Function(s)

tRNA 2'-phosphotransferase activity