Hs02407176_cn

• Gene Symbol: AS-PTPRE
• Assay Reference Genome Location: Chr.10:128060964 on build GRCh38
• Cytoband: 10q26.2

Target Gene Details

• Entrez Gene ID: 105378553
• Gene Name: lncRNA antisense to PTPRE protein-coding gene
• Gene Aliases: -
• Location: Chr.10:128057732-128062425 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AS-PTPRE	NR_136149.1
	NR_136150.1
	KR186191.1
	KR186192.1
	KR186193.1
	KR186194.1
	KR186195.1

Target Gene Details

• Entrez Gene ID: 5791
• Gene Name: protein tyrosine phosphatase, receptor type E
• Gene Aliases: HPTPE, PTPE, R-PTP-EPSILON
• Location: Chr.10:127907061-128085855 on Build GRCh38
• Assay Gene Location: Overlaps Intron 11 - Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PTPRE	NM_001316676.1			NP_001303605.1
	NM_001316677.1			NP_001303606.1
	NM_001323354.1			NP_001310283.1
	NM_001323355.1			NP_001310284.1
	NM_001323356.1			NP_001310285.1
	NM_001323357.1			NP_001310286.1
	NM_006504.5			NP_006495.1
	NM_130435.4			NP_569119.1
	XM_005252691.2			XP_005252748.1
	XM_011539994.2			XP_011538296.1
	XM_011539995.1			XP_011538297.1
	XM_011539996.1			XP_011538298.1
	XM_011539998.1			XP_011538300.1
	XM_017016467.1			XP_016871956.1
	XM_017016468.1			XP_016871957.1
	XM_017016469.1			XP_016871958.1
	AJ315969.1			CAC86583.1
	AJ430580.1			CAD23182.1
	AK290414.1
	AK291828.1
	AK299498.1
	AK300613.1
	BC050062.1			AAH50062.1
	BI910569.1
	BU159075.1
	BX648180.1
	DA470230.1
	X54134.1			CAA38069.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv989n100	Chr.10:128040003 - 128445808 on Build GRCh38	Gain	AS-PTPRE LINC01163 PTPRE MKI67

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protein phosphatase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

protein dephosphorylation
transmembrane receptor protein tyrosine phosphatase signaling pathway
regulation of mast cell activation
peptidyl-tyrosine dephosphorylation
negative regulation of insulin receptor signaling pathway

Function(s)

transmembrane receptor protein tyrosine phosphatase activity
protein binding
protein homodimerization activity