Hs02583398_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7404145 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	SENP3-EIF4A1 TMEM256-PLSCR3 SLC35G6 ASGR2 FGF11 FBXO39 TEKT1 SLC2A4 MIR497HG DVL2 CTDNEP1 SNORA67 C17orf49 CHRNB1 EIF5A SAT2 ELP5 FXR2 ASGR1 SNORD10 TMEM102 RNASEK YBX2 ALOX12P2 BCL6B CD68 ZBTB4 KCTD11 EIF4A1 DLG4 ATP1B2 ACAP1 ALOX12-AS1 SHBG NLGN2 CLEC10A TNFSF13 TMEM256 TNK1 CLDN7 ACADVL SLC16A11 TNFSF12 LOC100996842 MIR497 MIR324 MPDU1 SNORA48 SOX15 ALOX12 C17orf74 RNASEK-C17orf49 GPS2 POLR2A NEURL4 LOC107983988 SLC16A13 PLSCR3 MIR195 PHF23 TMEM95 SPEM1 SENP3 GABARAP TNFSF12-TNFSF13
esv2662967	Chr.17:7403326 - 7408473 on Build GRCh38	Deletion	NLGN2 TMEM256 TMEM256-PLSCR3
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	C17orf74 NLGN2 TMEM256 TNK1 POLR2A TMEM256-PLSCR3 SLC35G6 TMEM102 FGF11 LOC107983988 PLSCR3 SPEM1 TNFSF12 ZBTB4 TNFSF12-TNFSF13 CHRNB1
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	TMEM256 TMEM256-PLSCR3 PLSCR3
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	ACAP1 NLGN2 TMEM256 TNK1 TMEM256-PLSCR3 FGF11 CLDN7 ACADVL SLC2A4 DVL2 CTDNEP1 MIR324 CHRNB1 EIF5A ELP5 ASGR1 C17orf74 GPS2 TMEM102 NEURL4 LOC107983988 PLSCR3 YBX2 PHF23 TMEM95 SPEM1 GABARAP KCTD11 DLG4
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	SPEM1 C17orf74 NLGN2 TMEM256 TNK1 TMEM256-PLSCR3 LOC107983988 PLSCR3
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	TP53 SENP3-EIF4A1 TMEM256-PLSCR3 SLC35G6 ASGR2 FGF11 SLC2A4 MIR497HG DVL2 CTDNEP1 SNORA67 C17orf49 CHRNB1 EIF5A SAT2 ELP5 FXR2 ASGR1 SNORD10 TMEM102 RNASEK YBX2 BCL6B CD68 ZBTB4 KCTD11 EIF4A1 DLG4 ATP1B2 ACAP1 ALOX12-AS1 SHBG NLGN2 CLEC10A TNFSF13 TMEM256 TNK1 CLDN7 ACADVL WRAP53 SLC16A11 TNFSF12 LOC100996842 MIR497 MIR324 MPDU1 SNORA48 SOX15 ALOX12 C17orf74 RNASEK-C17orf49 GPS2 POLR2A NEURL4 LOC107983988 SLC16A13 PLSCR3 MIR195 PHF23 TMEM95 SPEM1 SENP3 GABARAP TNFSF12-TNFSF13

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function