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See other XKR5 CNV Assays ›
Gene Symbol
XKR5
Assay Reference Genome
Location

Chr.8:6810947 on build GRCh38
Cytoband
8p23.1
Assay ID Hs02611379_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 389610

Gene Name:

 XK related 5

Gene Aliases:

 HARL2754, UNQ2754, XRG5A, XRG5BM

Location:

 Chr.8:6808517-6835644 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
XKR5 NM_001289973.1 8 2601 NP_001276902.1
NM_207411.4 7 2463 NP_997294.3
XM_011534750.2 3 2969 XP_011533052.1
XM_017013401.1 6 2882 XP_016868890.1
XM_017013402.1 5 2674 XP_016868891.1
AY358489.1 7 2334 AAQ88853.1
AY534242.1 7 2463 AAT07091.1
AY534243.1 8 2455 AAT07092.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1021684 Chr.8:6492570 - 6951933 on Build GRCh38 Loss AGPAT5 DEFA4 ANGPT2 MIR4659A XKR5 MCPH1-AS1 MIR8055 DEFA6 GS1-24F4.2 DEFA8P MCPH1 DEFB1 MIR4659B
nsv610004 Chr.8:6544845 - 6915391 on Build GRCh38 Gain MCPH1 AGPAT5 ANGPT2 MIR4659A XKR5 DEFB1 MCPH1-AS1 MIR8055 MIR4659B GS1-24F4.2
nsv1025976 Chr.8:6615427 - 6829450 on Build GRCh38 Loss MCPH1 AGPAT5 MIR4659A XKR5 MCPH1-AS1 MIR8055 MIR4659B
esv3576520 Chr.8:6794391 - 7186524 on Build GRCh38 Gain DEFA10P DEFT1P DEFA4 XKR5 DEFA3 DEFA9P DEFA7P DEFA6 GS1-24F4.2 DEFA5 DEFA8P DEFA1B DEFB1 DEFA11P DEFT1P2 DEFA1
esv2422383 Chr.8:6504868 - 6924071 on Build GRCh38 Duplication MCPH1 AGPAT5 ANGPT2 MIR4659A XKR5 DEFB1 MCPH1-AS1 MIR8055 MIR4659B GS1-24F4.2
nsv831220 Chr.8:6670324 - 6870969 on Build GRCh38 Gain AGPAT5 MIR4659A XKR5 DEFB1 MCPH1-AS1 MIR4659B GS1-24F4.2
nsv610006 Chr.8:6710680 - 7063882 on Build GRCh38 Gain DEFA10P DEFT1P AGPAT5 DEFA4 MIR4659A XKR5 DEFA3 DEFA9P DEFA7P DEFA6 GS1-24F4.2 DEFA5 DEFA8P DEFA1B DEFB1 DEFA11P MIR4659B DEFT1P2 DEFA1
nsv1031577 Chr.8:6712833 - 8008628 on Build GRCh38 Gain USP17L3 XKR5 LOC107986910 DEFB106A LOC101928095 DEFB109P1B DEFB105B DEFB1 DEFB104A PRR23D1 MIR4659B DEFB107A DEFA1 DEFB4A FAM66E DEFT1P FAM66B USP17L4 DEFA6 USP17L1 DEFA8P DEFB106B DEFA1B LINC00965 DEFA11P DEFB107B ZNF705G USP17L8 FAM90A10P DEFB103B DEFT1P2 SPAG11A AGPAT5 MIR4659A DEFB4B DEFA3 DEFB104B DEFB105A GS1-24F4.2 FAM90A7P PRR23D2 OR7E154P DEFB108P1 DEFA10P DEFA4 OR7E125P DEFA9P DEFA7P SPAG11B DEFA5 ZNF705B DEFB103A LOC101929400
nsv465437 Chr.8:6797870 - 6971563 on Build GRCh38 Gain DEFA10P DEFA8P DEFA4 XKR5 DEFB1 DEFA9P DEFA6 GS1-24F4.2
esv2752262 Chr.8:6781378 - 7153553 on Build GRCh38 Gain DEFA10P DEFT1P DEFA4 XKR5 DEFA3 DEFA9P DEFA7P DEFA6 GS1-24F4.2 DEFA5 DEFA8P DEFA1B DEFB1 DEFA11P DEFT1P2 DEFA1
dgv6876n100 Chr.8:6687977 - 6812428 on Build GRCh38 Loss AGPAT5 MIR4659A XKR5 MCPH1-AS1 MIR4659B

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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