Name: [Hs02712310_cn] [CNOT3]
Creator: Thermo Fisher Scientific
Keywords: [CNOT3] Assay, [CCR4-NOT transcription complex subunit 3] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	4849
Gene Name:	CCR4-NOT transcription complex subunit 3
Gene Aliases:	LENG2, NOT3, NOT3H
Location:	Chr.19:54137689-54155708 on Build GRCh38
Assay Gene Location:	Within Exon 20

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CNOT3	NM_014516.3			NP_055331.1
	XM_005278279.1	18	2576	XP_005278336.1
	XM_005278280.2	18	2610	XP_005278337.1
	XM_005278281.1	18	2573	XP_005278338.1
	XM_005278282.2			XP_005278339.1
	AB014591.1
	AF180474.1			AAF29828.1
	AF211967.1	2	1721
	AI660119.1
	AK160386.1	16	4175	BAD18729.1
	AL133647.1			CAB63766.1
	BC016474.1			AAH16474.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3644783	Chr.19:54151022 - 54159664 on Build GRCh38	Gain	CNOT3 LENG1
nsv515623	Chr.19:54102901 - 54179150 on Build GRCh38	Loss	CNOT3 PRPF31 LENG1 TMC4 MBOAT7 TFPT NDUFA3
nsv953613	Chr.19:54097214 - 54198733 on Build GRCh38	Deletion	CNOT3 PRPF31 LENG1 TSEN34 TMC4 MBOAT7 OSCAR TFPT NDUFA3
esv2718812	Chr.19:53184636 - 54322450 on Build GRCh38	Deletion	MIR523 MIR516B2 MIR516A2 MIR521-2 MIR1323 NLRP12 CACNG6 VSTM1 MIR525 MIR519C MBOAT7 MIR526A2 MIR518A2 LILRA6 MIR517C LOC284379 LILRA5 MIR371B MIR520A MIR498 MIR373 LILRB5 ZNF761 LILRB2 MIR518B MIR518F CNOT3 MIR516B1 MIR520F RPS9 MIR519B MIR519A1 MIR527 MIR520D MIR526A1 MIR512-2 ZNF845 MIR519E MIR518C MIR524 MIR520C PRPF31 MIR520H BIRC8 MIR4752 ZNF818P LOC105372457 DPRX ZNF665 MIR517A MIR518D TARM1 CACNG7 MIR520G TMC4 MIR520B MIR512-1 LENG1 ZNF331 MIR515-1 MIR371A ZNF525 PRKCG MIR518E MIR519D LILRB3 MIR522 MIR521-1 ZNF677 MIR1283-2 OSCAR VN1R2 NDUFA3 FAM90A27P VN1R4 MIR1283-1 MIR515-2 TPM3P9 MIR526B MIR517B MIR519A2 MIR935 ZNF813 TSEN34 MIR516A1 MIR520E MIR372 MYADM MIR518A1 CACNG8 ZNF765 TFPT