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See other ABCA3 CNV Assays ›
Gene Symbol
ABCA3
Assay Reference Genome
Location

Chr.16:2285053 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02727565_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 21

Gene Name:

 ATP binding cassette subfamily A member 3

Gene Aliases:

 ABC-C, ABC3, EST111653, LBM180, SMDP3

Location:

 Chr.16:2275878-2340746 on Build GRCh38

Assay Gene Location:

 Within Intron 23
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA3 NM_001089.2 NP_001080.2
AB070929.1 BAB86781.1
AB210044.1 BAE06126.1
BC140895.1
BC146866.1
BC151840.1
U78735.1 AAC50967.1
X97187.1 CAA65825.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RPS2 HBA2 PTX4 MIR3178 NOXO1 C1QTNF8 HBZ MIR662 LINC00235 SNORD60 LOC100134368 LOC105371045 MIR4717 PRR25 TPSB2 AMDHD2 STUB1 CACNA1H MCRIP2 NDUFB10 E4F1 BAIAP3 HN1L FAM173A ABCA17P LINC00254 NME3 MIR1225 GFER TMEM8A ARHGDIG HAGHL CCDC154 PGP PDPK1 RAB26 RHBDL1 HBQ1 RGS11 NARFL SNHG9 NPRL3 MRPS34 MIR3176 LOC105371047 LOC729652 NHLRC4 MRPL28 SNORA64 DNASE1L2 CRAMP1 ERVK13-1 SNORA10 PKD1 HBA1 TBC1D24 MSRB1 HS3ST6 PIGQ AXIN1 TELO2 LOC105371184 LOC105371049 LOC105371046 PRSS27 NTN3 SOX8 CCNF MSLN TSR3 CEMP1 FLJ42627 CAPN15 MIR6859-4 LMF1-AS1 PRR35 LUC7L EME2 RAB40C LOC105371038 UBE2I WFIKKN1 SLC9A3R2 MLST8 CCDC78 PRSS29P DECR2 MPG MIR5587 LOC100287175 LOC107984876 METRN LMF1 MEIOB GNG13 TRAF7 FAM234A TPSG1 C16orf59 METTL26 MIR3177 NTHL1 WDR24 HBM RNPS1 CASKIN1 IGFALS ECI1 RPUSD1 SYNGR3 ATP6V0C SNRNP25 LOC101929280 BRICD5 POLR3K NME4 LOC652276 NPW SPSB3 MAPK8IP3 MIR3677 FAHD1 SSTR5 SSTR5-AS1 GNPTG LOC106660606 MIR3180-5 UNKL MIR6511B1 CHTF18 SNORA78 CLCN7 SNHG19 IFT140 MIR940 ZNF598 WDR90 RPL3L HAGH RPL23AP5 KCTD5 TSC2 MIR4516 RHBDF1 RAB11FIP3 JMJD8 PDIA2 C16orf91 FBXL16 WASIR2 TPSD1 MIR6767 RHOT2 NUBP2 TMEM204 TPSAB1 DDX11L10 RNF151 LOC107987233 MIR6768 TBL3 ABCA3
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss SLC9A3R2 NOXO1 MLST8 LOC106660606 MIR3180-5 DNASE1L2 SNORD60 MIR6511B1 MIR4717 SNHG19 TRAF7 PKD1 MIR940 ZNF598 NTHL1 E4F1 RNPS1 TSC2 LOC105371049 MIR4516 CASKIN1 MIR1225 GFER ECI1 SYNGR3 PGP BRICD5 RAB26 NPW MIR3677 TBL3 ABCA3
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss ABCA17P RNPS1 LOC106660606 MIR940 MIR4717 MIR3677 ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain LOC729652 MIR3178 MLST8 LOC106660606 MIR3180-5 DNASE1L2 SNORD60 MIR6511B1 MIR4717 SNHG19 TRAF7 AMDHD2 C16orf59 PKD1 MIR940 TBC1D24 E4F1 ABCA17P RNPS1 TSC2 LOC105371049 MIR4516 CASKIN1 MIR1225 NTN3 ECI1 CCNF PGP ATP6V0C CEMP1 BRICD5 PDPK1 MIR6767 RAB26 LOC652276 MIR3677 MIR6768 ABCA3
nsv952902 Chr.16:2143400 - 2339999 on Build GRCh38 Deletion RNPS1 MLST8 CASKIN1 LOC106660606 ECI1 DNASE1L2 SNORD60 MIR4717 PGP SNHG19 BRICD5 TRAF7 MIR940 RAB26 E4F1 MIR3677 ABCA3
nsv571202 Chr.16:2278649 - 2289619 on Build GRCh38 Loss ABCA3

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