Hs02731295_cn

• Gene Symbol: SATB1
• Assay Reference Genome Location: Chr.3:18348642 on build GRCh38
• Cytoband: 3p24.3

Target Gene Details

• Entrez Gene ID: 6304
• Gene Name: SATB homeobox 1
• Gene Aliases: -
• Location: Chr.3:18345388-18445588 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SATB1	NM_001131010.3	11	3053	NP_001124482.1
	NM_001195470.2	12	4651	NP_001182399.1
	NM_001322871.1	12	3197	NP_001309800.1
	NM_001322872.1	12	3101	NP_001309801.1
	NM_001322873.1	11	3101	NP_001309802.1
	NM_001322874.1	11	2915	NP_001309803.1
	NM_001322875.1	11	2913	NP_001309804.1
	NM_001322876.1	10	2866	NP_001309805.1
	NM_002971.5	11	4555	NP_002962.1
	XM_011533988.2	12	3111	XP_011532290.1
	XM_011533989.2	12	3011	XP_011532291.1
	AK127242.1	11	4560
	BE218845.1	1	228
	CD677701.1	1	204

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv460455	Chr.3:18344240 - 18386958 on Build GRCh38	Loss	SATB1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

helix-turn-helix transcription factor, DNA-binding transcription factor, Lambda repressor-like transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
chromatin organization
chromatin remodeling
transcription, DNA-templated
cellular component disassembly involved in execution phase of apoptosis
epidermis development
viral process
histone methylation
CD4-positive, alpha-beta T cell differentiation
CD8-positive, alpha-beta T cell differentiation
activated T cell proliferation
reflex

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
chromatin binding
double-stranded DNA binding
protein binding