Hs02761918_cn

• Gene Symbol: SYNE1
• Assay Reference Genome Location: Chr.6:152381020 on build GRCh38
• Cytoband: 6q25.2

Target Gene Details

• Entrez Gene ID: 23345
• Gene Name: spectrin repeat containing nuclear envelope protein 1
• Gene Aliases: 8B, ARCA1, C6orf98, CPG2, EDMD4, MYNE1, Nesp1, SCAR8, dJ45H2.2
• Location: Chr.6:152121684-152637399 on Build GRCh38
• Assay Gene Location: Overlaps Intron 60 - Exon 60

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SYNE1	NM_033071.3			NP_149062.1
	NM_182961.3			NP_892006.3
	XM_006715407.1			XP_006715470.1
	XM_006715408.2			XP_006715471.1
	XM_006715409.1			XP_006715472.1
	XM_006715410.2			XP_006715473.1
	XM_006715411.1			XP_006715474.1
	XM_006715412.2			XP_006715475.1
	XM_006715413.2			XP_006715476.1
	XM_006715414.1			XP_006715477.1
	XM_006715415.2			XP_006715478.1
	XM_006715416.2			XP_006715479.1
	XM_006715417.2			XP_006715480.1
	XM_006715420.2			XP_006715483.1
	XM_006715421.2			XP_006715484.1
	XM_006715422.1			XP_006715485.1
	XM_006715423.2			XP_006715486.1
	XM_006715424.2			XP_006715487.1
	XM_006715425.2			XP_006715488.1
	XM_011535641.2			XP_011533943.1
	XM_011535642.2			XP_011533944.1
	XM_011535643.1			XP_011533945.1
	XM_011535644.1			XP_011533946.1
	XM_011535645.2			XP_011533947.1
	XM_017010608.1			XP_016866097.1
	XM_017010609.1			XP_016866098.1
	XM_017010610.1			XP_016866099.1
	XM_017010611.1			XP_016866100.1
	XM_017010612.1			XP_016866101.1
	XM_017010613.1			XP_016866102.1
	XM_017010614.1			XP_016866103.1
	XM_017010615.1			XP_016866104.1
	XM_017010616.1			XP_016866105.1
	XM_017010617.1			XP_016866106.1
	XM_017010618.1			XP_016866107.1
	XM_017010619.1			XP_016866108.1
	AF495910.1			AAN60442.1
	AF535142.1			AAN03486.1
	AK056122.1			BAB71097.1
	BC039121.1			AAH39121.1
	BX537517.1			CAD97770.1
	FM162565.1

Target Gene Details

• Entrez Gene ID: 100505475
• Gene Name: SYNE1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.6:152380530-152381713 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SYNE1-AS1	NR_120501.1
	CK821189.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1015648	Chr.6:152339175 - 152508657 on Build GRCh38	Loss	SYNE1 SYNE1-AS1
nsv1032029	Chr.6:152166450 - 152408521 on Build GRCh38	Loss	SYNE1 SYNE1-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

nucleus organization
Golgi organization
establishment of nucleus localization
muscle cell differentiation
cytoskeletal anchoring at nuclear membrane
nuclear matrix anchoring at nuclear membrane

Function(s)

actin binding
protein binding
lamin binding
protein homodimerization activity
poly(A) RNA binding
actin filament binding